KEGG   Liquorilactobacillus hordei: BSQ49_03540
Entry
BSQ49_03540       CDS       T06631                                 
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
lhw  Liquorilactobacillus hordei
Pathway
lhw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lhw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BSQ49_03540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lhw03019]
    BSQ49_03540
Messenger RNA biogenesis [BR:lhw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BSQ49_03540
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_PNO1_2nd KH_KhpA-B KH_NusA_2nd KH_2 Propep_M14
Other DBs
NCBI-ProteinID: AUJ29354
UniProt: A0A3Q8CYA6
LinkDB
Position
757389..758954
AA seq 521 aa
MILTIIILAIAIITFGIGFAGGIVAHKKSYEKTLDIATQTAQGILKNAEKEAETQKKEAI
LEAKDESHRYRGEIENELKERRSEVQKQENRLLQREENLDRKDGILEKREQGLTQKENHM
EQQQKEIEKKEAKADALVHEQELELERVAELTHEEARKVVMSETKEALSHEMAVMIKDSE
DEAKASADRTARILIAQAIQRSAADTVSETTVSVVSLPNDEMKGRIIGREGRNIRTLETL
TGIDLIIDDTPEAVVLSGFDPIRREIAKMTLEKLIQDGRIHPARIEEMVEKSTKEMDAKI
RDIGEEAIFELGLHSIHPDLIKTIGRLKFRTSYGQNVLDHSIEVAKIAGVLASELGEDVT
MAKRAGLLHDIGKAIDHEVDGSHVQIGVELTKKYHESDTVINTIASHHGDVEAKYTIAVL
VAASDAISAARPGARSESLESYIHRLEKLEEITNAFDGVKKSYAIQAGREVRVIVKPNEV
SDLESTVLARDIKNQIEEEMEYPGHIKVTVIREIRAIEYAK
NT seq 1566 nt   +upstreamnt  +downstreamnt
ttgattttaacaattattatcctcgccatcgctattataacttttggaattggatttgct
gggggcatcgtggctcataagaagagttacgagaaaacactcgatattgctacgcaaact
gcgcaaggaattttgaagaatgctgaaaaagaggcagagacacaaaaaaaagaagctatt
ttagaagctaaggatgaaagtcatcgttatcgtggcgagatagaaaatgaattaaaggaa
cgtagatcggaagttcaaaaacaagaaaatcgtttactgcaaagagaggaaaacctagac
aggaaagacgggatacttgaaaaacgtgaacaaggattgacccaaaaagagaatcatatg
gagcagcagcaaaaagaaatagaaaaaaaagaagctaaagctgatgcattggttcatgaa
caagagttagagttagagagagtcgcagagttaacacatgaggaagctcgtaaggtagtg
atgtctgagactaaagaagcattaagccatgagatggcagttatgattaaagacagtgag
gatgaggccaaagctagtgctgaccgaactgctcgaattttaattgcacaggctattcaa
agaagtgcagcggacactgtttcagagacaactgtgtcggtggtttcattaccgaacgat
gagatgaagggacgtattattggtcgcgaaggtcgaaatattcgaacgttagaaacatta
acgggaatagacttaattattgatgatactccagaagcggttgttttgagtggatttgat
ccaattagaagagaaatcgctaaaatgacacttgaaaaattaattcaagatggtcgaatt
catcctgctagaattgaagagatggtcgaaaaatcaacaaaagagatggatgcgaagatt
cgcgatattggtgaagaagccatctttgaattgggattacactcaattcatcctgatttg
attaaaacaattggtcgtttgaagtttcggactagttatggtcaaaatgttcttgatcat
tcgattgaggttgcaaaaatagcaggtgtattggcctctgaattaggcgaagacgttact
atggcaaagcgggcaggtttattgcatgatatcggtaaggctattgatcatgaggttgat
ggttcacatgttcagattggtgttgaacttaccaaaaagtatcatgaaagtgacactgtt
attaatacaattgcttcacatcacggtgatgttgaggctaagtatacaattgctgtttta
gttgcagcttcagatgcaatttctgctgcgagacctggtgctcgaagtgaatcacttgaa
agttatattcatcgtcttgaaaaacttgaggaaattactaatgcttttgatggtgtcaag
aagagttatgcaattcaggctggacgtgaagtgcgtgtaatcgtaaaacctaatgaggtt
agcgatttagagtcaacggtgttggcacgagatattaaaaatcaaattgaagaagagatg
gaatatcctggacatatcaaagttactgtcatcagggaaattcgtgcgattgagtatgct
aaataa

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