Liquorilactobacillus hordei: BSQ49_03670
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Entry
BSQ49_03670 CDS
T06631
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lhw
Liquorilactobacillus hordei
Brite
KEGG Orthology (KO) [BR:
lhw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhw03019
]
BSQ49_03670
03009 Ribosome biogenesis [BR:
lhw03009
]
BSQ49_03670
Enzymes [BR:
lhw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BSQ49_03670
Messenger RNA biogenesis [BR:
lhw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BSQ49_03670
Ribosome biogenesis [BR:
lhw03009
]
Prokaryotic type
rRNA helicases
BSQ49_03670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Microtub_bd
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AUJ29378
UniProt:
A0A3S6QNE5
LinkDB
All DBs
Position
783834..785174
Genome browser
AA seq
446 aa
AA seq
DB search
MKETFEQFGFNEYINKALKKINFDTPTEVQQRLIPLIKEGRSVVGQSQTGSGKTHTFLLP
IINAINSSVAEVQAVITTPSRELAYQIYEATKQIIEEYPAQELSAANYVGGTDKQRQIDK
LKHRQPQIVIGTPGRVLDLVKNGALDIHKAHFLVVDEADMTLDLGFLKEVDAIASTLPTD
LQMLVFSATIPEKLKPFLKKYMQSPVVEVVENKNVISPTIDNWLLSTKGRDRNGIIYKLL
TMGQPYLALVFTNTKTRADELTDYLRAQGLKVAKIHGGIEPRERKRVMRDVQNLDYQYVV
ATDLAARGIDIEGVSHIINDDIPDDLEFFIHRVGRTGRNGMSGIAITLYAPSDDEKIAEL
EELGVKFKPKAIKNDEVVDSYDRDRREKRHVKKDRLDGKLVGMVKKEKKKKKPGYKNKIK
RAIKRQEQQDRKITRRQKTREERKKH
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaacatttgaacaattcggttttaatgagtatatcaacaaggctttaaagaaa
ataaattttgacacaccaacagaagttcaacagcggttaattccgttgataaaagaagga
agaagtgtagttggacaatcacagactggaagtgggaaaacacatactttcttgttacca
attattaatgctattaattcttctgtcgcagaagtccaagcagttattacgacacctagt
cgtgagctagcatatcagatatatgaagcaacaaagcaaattatagaagaatatcctgct
caggagctatctgcggctaattatgttggtggaactgataagcaacgacagattgataag
ttaaaacatcggcagccacaaattgtaattggaacacctggccgtgtacttgatttggtg
aagaatggtgcactagacattcataaggcccattttcttgtagtggatgaagctgatatg
acccttgatttgggtttcttaaaggaagttgatgcaattgcttcaacactgccaactgat
ttacagatgctggttttttcagcaactattccagagaaactaaaaccttttttgaagaag
tatatgcagtccccagttgtagaagttgttgagaataaaaatgtaattagtccaacaatt
gacaattggttgttatcaaccaaaggtagagaccgcaatgggataatttataaattatta
acgatgggacagccctatttggctttagttttcactaacacgaaaacaagagcggatgag
ttgacggattatctgcgtgctcaagggttgaaagtagccaaaattcatggtggaattgaa
cctcgtgagagaaaacgagtaatgcgagatgtccaaaatcttgactatcaatatgttgtt
gcaaccgatcttgcagcacgtggaattgatattgaaggagtatcacatattattaatgat
gatattccagacgatttagagtttttcattcatcgtgtcggaagaactggtcgaaatgga
atgagcggaattgcgattaccttatatgcaccaagtgatgatgaaaaaattgctgaactt
gaggaattgggtgtgaaattcaaacctaaagcaattaagaatgatgaagttgttgattct
tatgacagggatcggcgtgaaaaacgtcatgttaagaaggacagacttgatggtaagctt
gttggaatggtaaaaaaggaaaagaagaagaaaaagcctgggtataaaaataaaattaaa
cgtgcaattaaaaggcaagaacagcaagatcgaaaaattacaagaagacagaaaacgcgt
gaagaacgaaagaaacactga
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