Liquorilactobacillus hordei: BSQ49_07390
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Entry
BSQ49_07390 CDS
T06631
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lhw
Liquorilactobacillus hordei
Pathway
lhw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lhw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BSQ49_07390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhw03400
]
BSQ49_07390
Enzymes [BR:
lhw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BSQ49_07390
DNA repair and recombination proteins [BR:
lhw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BSQ49_07390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
RsgA_GTPase
HHH_5
TsaE
AAA_29
UvrD_C
nSTAND3
DEAD
UvrD-helicase
AAA
AAA_28
SLFN-g3_helicase
Zeta_toxin
AAA_12
NPHP3_N
ABC_tran
Ino80_Iec3
AAA_16
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AUJ30038
UniProt:
A0A3Q8CKG8
LinkDB
All DBs
Position
complement(1515443..1517863)
Genome browser
AA seq
806 aa
AA seq
DB search
MSQLDLLNTNDETEKYMVGSVDAIFFESPETFYKVVQVKIAQANFNWDEKEIVATGSFAD
INEGIEYRFVGKLVTHPRYGQQFQVFNYQNEMPSSKAGLIAYLSSDAFVGIGEKSATKIV
EMLGMDAIEQIIADEKKVKKLGLSQKQQATLIENLKANNGTQQIIIELNGFGFGSQMASS
IYNRYREKTIEVIHEDPYKLAREIPGIGFKRADQIAEKIGLAADTPQRIKAGLLQGIYDI
CQEKGDTYTNAEQLLNQTMVLLSNSRRVQLSPDLLADQLLELANDGIVVAEENRIYLRKY
YESEWRIAERIKEIKETKIKIDSGFENEFAQLIEKVEEQLGIKYGIDQIKAIKEALQSKI
YLLTGGPGTGKTTIINGIVAIYAALKDISLDINEYKNEQFPILLAAPTGRASKRMNETTG
LPASTIHRLLGLSSGDEDEREHNQLEGSLLIVDEMSMVDTGLFDTLMDAIPTNMQVIFVG
DKDQLPSVGPGQVFADLLASPDLPKIELKAIYRQENESSVITLAHAIKNGTLPTDIKQGK
SDRSFIECNAYQIENVVRQVVEKAKSKGFKTRDFQILAPMYRGPAGIDKLNEMLQEILNP
HVTGKKQVEFNKLHFRIGDKVLHLVNSPENNIFNGDIGEIVGIVTAKESKDHQESLIIDF
DDNEVEFKRKDWIKIRLAYCISIHKAQGSEFKMVILPMVQQYTRMLNRNLLYTAVTRAKD
FLILLGEPAAYMSSVKQVAINRETTLVKRLTAVFSPSEGNNDSKAEESVSEKKEDYVTNT
ILTVDLINSGKIDPMIGMGEITPASF
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcaattggatttgctaaatacgaatgatgagactgaaaagtatatggttggtagt
gtagatgccattttctttgagagcccagagactttctataaagtagtacaagttaaaatt
gcacaagctaattttaattgggatgaaaaagagattgttgcaacaggtagctttgctgat
attaatgaaggaatcgaatatcgatttgtaggtaaattagtaactcatccacgatatgga
caacagtttcaagtttttaactatcaaaatgaaatgccttctagtaaagcaggattaatt
gcttatttgtcaagcgatgcttttgttggaattggtgagaagtcagctacaaaaatcgtt
gaaatgttaggcatggacgcaattgaacagattattgctgacgaaaaaaaagtaaaaaaa
ttgggactcagtcaaaaacaacaagcaactttaattgaaaatttaaaggctaataacgga
acacagcaaatcattatcgagctcaatggtttcggatttggtagccaaatggcatcatcg
atttataatcgctatcgtgaaaaaacaattgaagttattcatgaagatccatataaatta
gcacgagaaattccagggattgggttcaaacgtgctgatcaaattgcggaaaaaattggt
ttagcggctgatacaccacaaagaattaaggcaggacttcttcagggaatatatgatatt
tgtcaggaaaagggcgatacatatacaaatgcagagcaattattgaatcaaacaatggtt
ctattgagtaatagtcgaagagttcaactctcaccggatttacttgccgatcaacttttg
gaattagcaaatgatggtattgtagttgcagaagaaaatagaatatacttgagaaaatat
tatgagtccgagtggcgaattgctgagagaattaaagagattaaggaaacaaaaattaaa
attgacagtggttttgaaaatgaatttgcacaattgatagaaaaagttgaagagcagctt
gggataaaatatgggattgatcagattaaggcaatcaaagaagcactccaatccaaaatc
tatttgctaacgggcgggcctggaacaggaaagacaactattattaatggtattgtagcg
atttatgctgcattgaaagacatttcgttagacatcaatgaatataagaatgaacaattt
ccaattcttttagctgcaccaacaggtagagcgtctaaaagaatgaatgaaacgacagga
ctgcctgctagcacaattcatcgtttattaggattgagcagtggtgatgaagacgaacgt
gagcacaatcaattggaaggaagtttattgattgttgatgaaatgtcgatggtagatacg
ggattattcgataccttaatggatgccattccaacaaatatgcaggttatctttgttggt
gataaagaccaattaccttcagtgggaccaggacaagtatttgccgatttgttggcaagt
ccagatttgcctaagattgaattgaaagcaatctatcgtcaagaaaatgaatcttcagtt
attactttggcacatgcaattaagaatggaactttgccgactgatatcaaacaaggtaag
agtgatcgctcgttcattgaatgcaatgcttatcagattgagaatgtagtccgccaagtg
gttgaaaaggccaagtctaagggattcaaaacacgagattttcaaatactggctcctatg
tatcgaggacctgctggaattgacaagttaaatgagatgttacaagaaatcttaaatccc
catgttacaggaaagaaacaagttgagtttaacaaactgcattttagaattggtgataag
gtgttgcatctcgtaaattcacctgaaaataatatatttaatggagacattggtgaaatt
gtggggattgttactgctaaggaaagcaaggatcatcaggagtctttgataattgatttt
gatgataatgaggttgaatttaagcgtaaagattggataaaaatccgtttagcatattgt
atatcaattcataaagcacagggcagtgagtttaaaatggttattttgccaatggtccag
caatatactaggatgcttaatcgtaatcttttatatactgcagtcacacgagcaaaagat
tttttgattctattgggtgagccagctgcgtatatgagtagtgttaaacaagttgcaatt
aatcgagaaacgacacttgttaaacggttaacagctgtttttagtccatcagaaggcaat
aacgatagtaaagcagaagaaagtgtttcagaaaaaaaagaagattatgtaactaatacc
attttaacagtggatttaataaatagcgggaagattgacccaatgattggaatgggtgaa
attacaccagcctctttttga
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