Liquorilactobacillus hordei: BSQ49_07920
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Entry
BSQ49_07920 CDS
T06631
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lhw
Liquorilactobacillus hordei
Pathway
lhw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lhw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BSQ49_07920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhw03400
]
BSQ49_07920
Enzymes [BR:
lhw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BSQ49_07920
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BSQ49_07920
DNA repair and recombination proteins [BR:
lhw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BSQ49_07920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Cas12f1-like_TNB
Zn_ribbon_TOP3B
Motif
Other DBs
NCBI-ProteinID:
AUJ30138
UniProt:
A0A3S6QQ75
LinkDB
All DBs
Position
complement(1619235..1620062)
Genome browser
AA seq
275 aa
AA seq
DB search
MPELPEVETVRQGLRQLVLNKKIRNVRVLYPKIINGDTNIFIETVEGLTIKEIGRRGKYL
IFNFNEGTSLVSHLRMEGKYFVRQTGDEIEKHTHIIFEFTDGKQLRYNDVRKFGRMELVR
TDKVNDLKGIKKLGPEPTETDFDLENFTNKLKNKNKMIKPALLDQTLVAGLGNIYADEVL
WMSKINPETPARHLEKKEISILRNAIIAELAKAVKAGGTTIRSYTNAFENSGAFQFELNA
YGKTGEPCSRCGTLIKKIVVAQRGTHYCPNCQKVE
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaagttgaaactgtccgccaaggattgcgtcaattagtattgaac
aaaaaaattcgcaatgttagggtactttaccctaagattataaatggcgataccaatatt
tttattgaaacggttgaaggattgacaatcaaagaaattggccgtcgtgggaaatattta
atttttaatttcaacgagggaacttcattagtttcccatttgcgaatggaaggaaagtat
tttgtgagacaaacaggggatgaaatcgagaaacatactcacattatttttgaatttacc
gacggaaaacagcttagatataatgatgtccgcaagtttggtcgaatggagttagttaga
actgacaaggttaacgacctaaaaggtataaaaaaattgggaccagaaccaacggaaact
gattttgatttagaaaatttcacaaataaattgaaaaacaaaaataagatgattaagcct
gcattgcttgatcaaactttagttgcgggtttaggaaatatttatgctgatgaagtttta
tggatgagtaagataaatccagagacgccagcaagacatcttgagaaaaaggaaatcagt
attttgcgtaacgcaattatagctgagctagcaaaagctgtaaaagctggtggaacaact
attagaagttatacaaatgcatttgaaaactcaggagcgttccaatttgagttaaacgcc
tatgggaaaacaggtgaaccttgtagtagatgtggcacattaattaaaaagatcgttgtt
gctcaacgaggcacgcattattgcccaaattgtcagaaggtggagtaa
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