Lysobacter helvus: LYSHEL_01510
Help
Entry
LYSHEL_01510 CDS
T07483
Symbol
rnD
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
lhx
Lysobacter helvus
Brite
KEGG Orthology (KO) [BR:
lhx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lhx03016
]
LYSHEL_01510 (rnD)
Enzymes [BR:
lhx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LYSHEL_01510 (rnD)
Transfer RNA biogenesis [BR:
lhx03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LYSHEL_01510 (rnD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
BCT94280
LinkDB
All DBs
Position
146345..147460
Genome browser
AA seq
371 aa
AA seq
DB search
MHHWITDPADLAARLAHRPARVGLDTEFIRERTYWPQLALVQIAYAGNAGDGRSDDQTIL
LADMLVPGMCEALAPLLADPNVLKVMHSASEDIVALKRSCGVAPSPLFDTQIAAGIAGVG
AGMGYQRIVQDLLGVALQKGEQRSDWLRRPLTDSQRHYAAEDVVYLDALYRELSARLDTL
GRRAWLEEDSARLALGVDEAGERWPHLALRAAQFLDTDAQHRLLRLLRWRDAYARTSDRP
RTWILDNELATALARTPPIDRDALKRHLDTIPKSPRSLVDALWTALTTPLPDEAEAPLPR
SEERDKLALRKLQDTTAEVSRELGLPDGVLASRRWLEALLDGHDWPGALSGWRRAQLEPR
LKPLLAPSPAN
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
gtgcaccactggatcaccgaccccgccgacctcgccgcgcgcctcgcgcaccgccccgcc
cgcgtgggcctggacaccgaattcatccgcgaacgcacctactggccgcaactggccctg
gtgcagatcgcctacgccggcaacgcgggcgacggacgcagcgacgaccagaccatcctg
ctcgccgacatgctggtgcccggcatgtgtgaagccctcgcaccgctcctcgccgatccg
aacgtgctgaaggtgatgcacagcgcgagcgaagacatcgtggcgctcaagcgcagttgc
ggcgtggcaccctcgcccttgttcgatacgcagatcgccgcgggcatcgcgggcgtcggc
gcgggcatgggctaccagcgcatcgtgcaggacctgctgggcgtggcgctgcagaagggc
gagcagcgctcggactggttgcgccgcccgctgacggattcgcaacgccactacgccgcc
gaggacgtggtgtacctggacgcgctgtatcgcgaactgtcggcgcgcctggacacgctg
ggccgccgcgcgtggctggaggaagacagcgcgcgcctcgcgctcggcgtggacgaagcc
ggcgaacgctggccccacctggcgctgcgcgccgcgcaatttctcgacaccgacgcgcag
catcgcctgctgcgcttgctgcgctggcgcgatgcgtatgcgcgcacgagcgaccggccg
cgcacctggatcctcgacaacgaactggccaccgcgctcgcgcgcacgccgccgatcgac
cgcgatgcattgaagcgccacctcgacacgatcccgaaatccccgcgcagcctcgtcgat
gcgctgtggaccgcattgacgacgccgctgcccgatgaagccgaagcaccgttgccgcgc
agcgaagagcgcgacaagctcgcgctgcgcaagttgcaggacaccaccgcggaagtctcg
cgcgaactcggcctgcccgatggcgtgctcgcttcgcgacgctggctggaagcgctgctc
gacggccacgactggcccggtgcgttgtcgggctggcggcgcgcgcaactcgaaccgcgg
ctcaagccgctgctggcgccctcgcccgcgaactga
DBGET
integrated database retrieval system
