Lysobacter helvus: LYSHEL_01970
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Entry
LYSHEL_01970 CDS
T07483
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
lhx
Lysobacter helvus
Pathway
lhx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lhx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LYSHEL_01970 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhx03400
]
LYSHEL_01970 (xseA)
Enzymes [BR:
lhx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LYSHEL_01970 (xseA)
DNA repair and recombination proteins [BR:
lhx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LYSHEL_01970 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BCT94326
UniProt:
A0ABN6G0Q0
LinkDB
All DBs
Position
191802..193145
Genome browser
AA seq
447 aa
AA seq
DB search
MTRDDARKILSPTQLNTLARDLLEGAFPLVWVEGELGNLSRPGSGHLYFTLKDARAQVRC
ALFKPKSQWLNFVPREGLRVLARGRLTLYEARGDYQLILDSLEEAGEGALRRAFEELKAK
LQAEGLFEAERKRPLPAFVRRIGVLTSPSGAAVRDVLSVLARRFPLVEVDVLPVQVQGET
APAQIVAMLQRAVRSGRYDTLLLARGGGSLEDLWAFNDERLVRSIAASPIPVVSAIGHET
DFSLSDFVADLRAPTPSVAAELLVPARADLRVRLQGLHRRMATLQLHHLRRDAQRADRAA
LRLHALRPRARLDLLLRRQAEAQRRLEAAWRKQLEHWRARMRHADAVLRTMQPRRRVALL
RQRLEALRQRPRSVIARRLQHDAMHLRGLARSLEAVSPLATVARGYSILLRDDGHVVRGV
NDAKVGDRVQARLADGTLPLRVIAPDD
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcgacgacgcccgcaagatcctctcgcccacccagctcaacacgctggcgcgc
gacctgctggaaggggcgttcccgctggtgtgggtggaaggcgagctggggaatctctcc
cggcccgggtccgggcacctctacttcaccctgaaggacgcgcgcgcccaggtgcgctgc
gcgctgttcaagcccaagagccagtggctgaacttcgtcccgcgcgaaggcctgcgcgtg
ctcgcgcgcggccgcctcacgctgtacgaggcgcgtggcgactaccagctgatcctggat
tcgctggaggaagcgggcgaaggcgcgctgcggcgggcgttcgaggaactcaaggcgaag
ctgcaggccgagggcctgttcgaagccgaacgcaagcgccccctgcccgccttcgtgcgg
cgcatcggcgtgctcacctcgccgtcgggcgcggcggtgcgcgatgtgctgagcgtgctg
gcgcggcgcttcccgctggtggaagtggatgtgctgccggtgcaggtgcagggcgaaacg
gcgccggcacagatcgtcgcgatgctccagcgcgcggtgcgctccgggcgctacgacacg
ctgctgctcgcccgcggcggcgggtcgctcgaagacctgtgggccttcaacgacgagcgg
ctggtgcgctcgatcgcggcatcgccgattccggtcgtctcggcgatcgggcacgagacg
gatttcagcctcagcgatttcgtggcggacctgcgtgcgccgacgccgtcggtcgccgcc
gaactgctggtgcccgcgcgcgccgacctgcgcgtgcgcctgcagggcctgcatcggcgc
atggcgacgctgcagctgcaccatctgcgtcgcgacgcacagcgcgccgatcgcgcggcg
ctgcgcctgcacgccctgcgcccccgcgcgcgcctggacctgctgctgcggcgccaggcc
gaagcgcagcggcgcctggaggccgcatggcgcaagcaactcgaacattggcgcgcgcgc
atgcgccacgccgacgcggtgttgcgcaccatgcaaccgcgccggcgcgtggccttgctg
cgccagcggctggaagcgctgcggcagcgtccgcgttcggtgatcgcgcggcgcctgcag
cacgatgcgatgcacctgcgtgggctggcgcgttcactggaagcggtgagtccgctggcc
acggtggcgcgcggctacagcatcctgctgcgcgacgatggacacgtcgtgcgcggggtg
aacgatgcgaaggtcggggatcgcgtgcaggcgcgcctggccgatggaaccctgccgttg
cgcgtgatcgcccccgacgattga
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