Lysobacter helvus: LYSHEL_02260
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Entry
LYSHEL_02260 CDS
T07483
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
lhx
Lysobacter helvus
Pathway
lhx03030
DNA replication
lhx03430
Mismatch repair
lhx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lhx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LYSHEL_02260 (holB)
03430 Mismatch repair
LYSHEL_02260 (holB)
03440 Homologous recombination
LYSHEL_02260 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhx03032
]
LYSHEL_02260 (holB)
03400 DNA repair and recombination proteins [BR:
lhx03400
]
LYSHEL_02260 (holB)
Enzymes [BR:
lhx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LYSHEL_02260 (holB)
DNA replication proteins [BR:
lhx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LYSHEL_02260 (holB)
DNA repair and recombination proteins [BR:
lhx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LYSHEL_02260 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_5
AAA_22
DUF6879
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
BCT94355
UniProt:
A0ABN6FXE9
LinkDB
All DBs
Position
complement(222772..223743)
Genome browser
AA seq
323 aa
AA seq
DB search
MNPLPPLAPWQARAYAHLVSILEAGRLGHGVLFCGPAGLGKRAVAERLAQRALCRAPLPN
GDPCNACRSCQLFAAGTHPDFGLVSFIFNKEGTKLRTEIVIEQIRSLSERLALTPQYGGA
QVAILDPADAINHAAANALLKTLEEPQPDRYLWLVSAHPQRLSATIRSRCQRVEFRLPPI
EEAQAWLATQGHSVALAAEALEAARGHPGLADAWLRGEGLAVRRQVAADLDKLARGTAGA
VETAQAWVADEYAALRLSHAADLALAQAARLTDPRGTRRLAAWFDAANRTRDLLRTTVRA
DLAVTELLMAWRGDAPVSKGGRA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgttgccgccgctcgcgccctggcaagcccgcgcgtatgcgcatctcgtatcg
atcctggaagcagggcggctcgggcacggcgtgctgttctgcggtccggcgggcctgggc
aagcgcgcggtcgccgagcgcctggcgcagcgcgcgttgtgccgcgcgccattgccgaac
ggcgatccatgcaacgcctgccggtcgtgccagttgttcgccgccggcacgcacccggac
ttcggcctggtgtccttcatcttcaacaaggaagggacgaagctgcgcacggagatcgtg
atcgagcagatccgttcgctgtcggaacgcctcgcgctcacgccgcaatatggcggcgcc
caggtcgcgatcctcgacccggctgacgcgatcaaccacgcggccgccaacgctttgctc
aagacgctcgaagaaccgcaacccgatcgttatctctggctggtcagcgcgcatccgcaa
cgcttgtcggcgacgatccgcagtcgctgccagcgcgtggaattccggttgccgccgatc
gaggaagcgcaggcctggctcgccacgcaagggcacagcgtcgcactggctgccgaagcg
ctggaagcggcgcgcggccatccgggcctcgccgatgcgtggctgcggggcgaggggctg
gcggtgcgtcgccaggtcgcggccgacctggacaagctcgcgcgcgggaccgccggcgcg
gtggagaccgcgcaagcctgggtggccgatgaatacgccgcgctgcgtttgagccatgcg
gcggacctcgcgctggcgcaggccgcgcgcttgaccgatccaaggggaacccgcaggctg
gctgcgtggttcgacgccgcgaaccgcacgcgcgacctgttgcggaccaccgtgcgcgcg
gacctcgcggtcacggaattgctgatggcgtggcgcggcgatgcgcccgtttcgaaaggg
ggcagggcatga
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