Lysobacter helvus: LYSHEL_07630
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Entry
LYSHEL_07630 CDS
T07483
Symbol
pilR
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
lhx
Lysobacter helvus
Pathway
lhx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lhx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LYSHEL_07630 (pilR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
lhx02022
]
LYSHEL_07630 (pilR)
02035 Bacterial motility proteins [BR:
lhx02035
]
LYSHEL_07630 (pilR)
Two-component system [BR:
lhx02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
LYSHEL_07630 (pilR)
Bacterial motility proteins [BR:
lhx02035
]
Pilus system
Twitching motility proteins
LYSHEL_07630 (pilR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_16
AAA_5
HTH_50
Mg_chelatase
Pre_tape_measure
Motif
Other DBs
NCBI-ProteinID:
BCT94892
LinkDB
All DBs
Position
775030..776472
Genome browser
AA seq
480 aa
AA seq
DB search
MNDQRSALIVDDERDIRELLVLTLGRMGLRTETASSLGEARALLAAHRFDLCLTDMRLPD
GSGIDLIGEITQQYPNTPVAMITAFGNVDAAVEALKAGAFDFVSKPVDLAVLRGLVKHAL
DLPQKGSKRSASIAAASDVLATRLFGDSPAIVALKATLGKVARSQAPVYIAGESGVGKEL
VARTIHEQGARGAGPFVPVNCGAIPAELMESEFFGHKKGSFTGAHADKPGLFQAADGGTL
FLDEVAELPLPMQVKLLRAIQEKSIRPVGANAEVLVDVRILSATHKDLGALVNEGRFRHD
LYYRINVIELRVPPLRERRDDLPGLADAILRRLSGAQGRHLPALSADAVDALRTYPFPGN
VRELENILERAMALAEGDVIELADLRLPVWGPAMTTPAQPGAREPVREAPLMREPMTRDP
RTTDPRDSMTSALPSYIEEIERNAIQQALEDNRYNKTKAAAALGITFRALRYKLKKLGID
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaccagcgcagtgcattgatcgtcgacgacgagcgcgacatccgcgaattgctg
gtgctcacgctgggtcgcatgggcttgcgcaccgaaaccgcgtcgagcctcggcgaggcg
cgcgcgttgctcgcggcgcaccgcttcgacctgtgcctcaccgacatgcgcctgcccgac
ggctcgggcatcgacctaatcggcgaaatcacgcagcaataccccaacacgccggtcgcg
atgatcaccgcgttcggcaacgtcgacgccgcggtggaagccctgaaggccggcgcgttc
gacttcgtcagcaagcccgtggacctggccgtgttgcgcggcctggtgaagcacgcgctg
gatcttccgcagaaaggcagcaagcgcagcgcgagcatcgcggcggcaagcgacgtgctg
gcaacgcgcctgttcggcgactcgcccgccatcgtcgcgctcaaggccacgctcggcaaa
gtcgcgcgcagccaggcgccggtgtacatcgccggcgaatcgggcgtgggcaaggaactc
gtcgcgcgcaccatccacgaacagggcgcacgcggcgcaggtcccttcgtgccggtcaac
tgcggtgcgattcccgccgaactgatggagagcgaattcttcggacacaagaaggggtcg
ttcaccggcgcgcacgcggacaagcccggcctgttccaggccgccgacggcggcaccttg
ttcctcgacgaagtcgccgagctgccgctgccgatgcaggtcaagctgctgcgcgcgatc
caggaaaaatcgatccgccccgtcggcgcgaacgccgaagtcctcgtcgacgtgcgcatc
ctctcggccacgcacaaggatctcggcgcgctcgtcaacgaaggccgcttccgccacgac
ctgtactaccgcatcaacgtcatcgaactgcgcgtgccgccgctgcgcgaacgccgcgac
gacctgccgggcctggccgatgcgatcctgcgtcgcctctccggcgcgcagggccgccac
ctgcccgcgctcagcgcggacgcggtggatgcgctgcgcacctatcccttccccggcaac
gtgcgcgaactggagaacatcctcgagcgcgcgatggcgctggccgaaggcgacgtcatc
gaactcgcggacctgcgcctgcccgtctggggcccggcgatgaccacgccggcgcagccc
ggcgcgcgcgaaccggtgcgcgaagccccgctgatgcgcgaaccgatgacgcgcgatccg
cgcaccaccgatccgcgcgacagcatgaccagcgcgttgccgagctacatcgaagagatc
gaacgcaacgcgatccagcaggcgctcgaagacaatcgctacaacaagaccaaggccgcc
gcggccctcgggatcaccttccgggccctgcgctacaagctcaagaagctcggcatcgac
tga
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