Lysobacter helvus: LYSHEL_08200
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Entry
LYSHEL_08200 CDS
T07483
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lhx
Lysobacter helvus
Pathway
lhx00260
Glycine, serine and threonine metabolism
lhx00460
Cyanoamino acid metabolism
lhx00630
Glyoxylate and dicarboxylate metabolism
lhx00670
One carbon pool by folate
lhx00680
Methane metabolism
lhx01100
Metabolic pathways
lhx01110
Biosynthesis of secondary metabolites
lhx01120
Microbial metabolism in diverse environments
lhx01200
Carbon metabolism
lhx01230
Biosynthesis of amino acids
lhx01240
Biosynthesis of cofactors
lhx04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
lhx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LYSHEL_08200 (glyA)
09102 Energy metabolism
00680 Methane metabolism
LYSHEL_08200 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LYSHEL_08200 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LYSHEL_08200 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LYSHEL_08200 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LYSHEL_08200 (glyA)
Enzymes [BR:
lhx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LYSHEL_08200 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
DUF732
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
BCT94949
UniProt:
A0ABN6G105
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All DBs
Position
complement(834687..835937)
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AA seq
416 aa
AA seq
DB search
MFPRDSRIEGFDPELAQAIAGENRRQEDHVELIASENYASPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDVAERLAIDRCKQLFGADYANVQPHSGSQANQAVYLALLSPGDTILGMS
LAHGGHLTHGAKVNISGKLFHAVQYGVDDKGMIDYDEVERLALEHKPKMVVAGFSAYSQV
VDWARFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTSTTHKTLRGPRGGIIV
AKANEELEKKLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPEFKAYQQQVVKNAQAMAKT
IIQRGYKIVSGGTENHLMLVDMIGKGITGKDAEAALGKAHITVNKNAVPNDPEKPFVTSG
LRLGTPAVTTRGYGEAECVALANWICDVLDAPKDEDVIKRVRDEVTKQCKAYPVYG
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgttcccccgcgacagccgcatcgaaggtttcgaccccgaactcgcccaggccatcgcc
ggcgagaaccgccgccaggaagaccacgtcgagctgatcgcgtcggaaaactacgccagc
ccgcgcgtgatggaagcgcagggcagccagctcaccaacaagtacgccgagggctacccc
ggcaagcgctattacggcggctgcgaatacgtcgacgtcgccgagcgcctggcgatcgac
cgctgcaagcagctgttcggcgccgactacgccaacgtgcagccgcattcgggttcgcag
gccaaccaggccgtgtacctggcgctgctgtcgccgggcgacacgatcctcggcatgtcg
ctggcgcatggcggccatctcacgcacggtgcgaaggtcaacatcagcggcaagctcttc
cacgcggtgcagtacggcgtggacgacaagggcatgatcgattacgacgaagtcgaacgc
ctcgcgctcgagcacaagccgaagatggtcgtcgccgggttcagcgcgtactcgcaggtg
gtcgactgggcgcgcttccgcgcgatcgccgacaaggtgggcgcgtacctgttcgtcgac
atggcgcacgtcgccggcctcgtcgccgcgggcgtgtatcccaacccggtgccgcacgcg
cacgtcgtcacctcgaccacgcacaagacgctgcgcggtccgcgcggcggcatcatcgtc
gccaaggcgaacgaagaactcgaaaagaaactgcagtcgatcgtgttcccgggcatccag
ggcggtccgctgatgcacgtgatcgcggcgaaggccgtggcgttcaaggaagcgctggag
ccggagttcaaggcgtaccagcagcaggtcgtgaagaacgcgcaggcgatggcgaagacc
atcatccagcgcggctacaagatcgtctccggcggcacggaaaaccacctgatgctcgtc
gacatgatcggcaagggcatcaccggcaaggacgcggaagccgcgctgggcaaggcgcac
atcaccgtgaacaagaacgcggtgccgaacgatccggaaaagccgttcgtgacgtcgggc
ctgcgcctgggcacgccggcggtgacgacgcgcggctacggtgaagccgaatgcgtggcg
ctggcgaactggatctgcgacgtgctggatgcgccgaaggacgaagacgtgatcaagcgc
gtgcgggatgaagtgacgaagcagtgcaaggcttatccggtgtacggctga
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