Lysobacter helvus: LYSHEL_08840
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Entry
LYSHEL_08840 CDS
T07483
Symbol
metB_1
Name
(GenBank) cystathionine gamma-synthase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
lhx
Lysobacter helvus
Pathway
lhx00260
Glycine, serine and threonine metabolism
lhx00270
Cysteine and methionine metabolism
lhx00450
Selenocompound metabolism
lhx00670
One carbon pool by folate
lhx01100
Metabolic pathways
lhx01110
Biosynthesis of secondary metabolites
lhx01230
Biosynthesis of amino acids
Module
lhx_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
lhx00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LYSHEL_08840 (metB_1)
00270 Cysteine and methionine metabolism
LYSHEL_08840 (metB_1)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LYSHEL_08840 (metB_1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LYSHEL_08840 (metB_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lhx04147
]
LYSHEL_08840 (metB_1)
Enzymes [BR:
lhx01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
LYSHEL_08840 (metB_1)
Exosome [BR:
lhx04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
LYSHEL_08840 (metB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Aminotran_1_2
Aminotran_5
Met_gamma_lyase
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
BCT95013
LinkDB
All DBs
Position
complement(907465..908634)
Genome browser
AA seq
389 aa
AA seq
DB search
MKEQDTRAMGPGTKAIHAGQSPDPTTGAVMPPIYATSTYAQSSPGVHQGFEYSRTHNPTR
FAYERCIAALEGGTRGYAFGSGLAATSTLLELFDSGDHIIAMDDVYGGTFRLFERVRRRS
AGLDFSWVDLTDPAKFEAAITPKTKMVWIETPTNPLLKIVDIAAIAKIAKAHGLMVVVDN
TFSSPMVQRPLEHGADIVMHSATKYLNGHSDMVGGILVVGDNTELAEQLAFLQNSIGAVQ
GPFDSFLALRGLKTLHLRMRAHCENALALAQWLESHPAIERVVYPGLPSHPHHALAKQQM
DGFGGIVTIFVKGGLEAAKRFCERTQLFTLAESLGGVESLVNHPAIMTHASIPPERRAQL
GLFDNLVRLSVGVEDVADLQRDLAAALQS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagcaggacacgcgcgccatgggccccggcaccaaggcgatccacgccggtcaa
tcgcccgacccgaccaccggggcggtcatgccgccgatctacgccacgtccacgtacgcc
cagtccagccccggcgtgcaccaggggttcgagtactcgcgcacgcacaacccgacccgg
ttcgcctacgagcgctgcattgccgcgctcgagggcggtacccgcgggtacgcgttcggc
tcgggcctggccgcgacctccacgctgctggagctgttcgacagcggcgaccacatcatc
gcgatggacgacgtgtacggcggcaccttccgcctgttcgaacgcgtgcgccgccgctcg
gcgggcctggacttcagctgggtcgatctcaccgatccggccaagttcgaagccgcgatc
acgccgaagacgaagatggtgtggatcgagacccccaccaaccccttgctgaagatcgtc
gacatcgccgcgatcgcgaagatcgcgaaggcgcacgggttgatggtggtcgtcgacaac
accttctcctcgccgatggtgcagcgcccgctcgaacacggcgccgacatcgtcatgcac
tcggccaccaagtacctcaacggccactccgacatggtcggcggcatcctcgtggtcggc
gacaacaccgaactcgccgaacagctcgccttcctgcagaactcgatcggcgcggtgcag
ggcccgttcgacagcttcctcgcgttgcgcggcctgaagacattgcacctgcgcatgcgc
gcgcattgcgagaacgcgctcgcgctggcgcagtggctcgaatcgcatccggcgatcgaa
cgcgtcgtctacccgggcttgccctcgcacccgcaccacgcgctggcgaagcagcagatg
gacggcttcggcggcatcgtcacgatcttcgtcaagggcgggctcgaggcggcgaagcgc
ttctgcgagcgcacgcagctgttcacgctcgccgaatcgctgggcggcgtggaaagcctc
gtcaaccatcccgcgatcatgacgcacgcctcgatcccgccggagcgtcgtgcgcaactc
ggcctgttcgacaacctggtgcgcctgagcgtcggtgtcgaagacgtcgcggacctgcaa
cgcgacctcgccgcggcgctgcagtcgtaa
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