Lysobacter helvus: LYSHEL_11370
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Entry
LYSHEL_11370 CDS
T07483
Symbol
uvrD
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lhx
Lysobacter helvus
Pathway
lhx03420
Nucleotide excision repair
lhx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lhx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LYSHEL_11370 (uvrD)
03430 Mismatch repair
LYSHEL_11370 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhx03400
]
LYSHEL_11370 (uvrD)
Enzymes [BR:
lhx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LYSHEL_11370 (uvrD)
DNA repair and recombination proteins [BR:
lhx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LYSHEL_11370 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
LYSHEL_11370 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
DUF3553
Motif
Other DBs
NCBI-ProteinID:
BCT95266
LinkDB
All DBs
Position
complement(1167045..1169219)
Genome browser
AA seq
724 aa
AA seq
DB search
MDVSHLLDALNPAQREAVTAAAGHYLVLAGAGSGKTRVLMHRIAWLNEVMGVPPHGILAV
TFTNKAAGELRHRAEHLLRNGSRGMWIGTFHGLAHRLLRLHWQDAGLPEGFQVLDSDDQL
RLVKRVVQQLELDDTRFPPRQIAWWINAQKDEGRRAENIQPGSDWFMDTMRKAYAAYQER
CERAGLVDFAELLLRAHELLRDNAGLLAHYRHRFGEVLVDEFQDTNAIQYGFVRLLAGET
GHVFVVGDDDQAIYGWRGAKVENVQRFLRDYPGATTLRLEQNYRSTSNILNAANAVIAHN
PDRLGKQLWTDAGEGEPIDLYAAYNEIDEARFVVERIRAWVRDGGSHGECAILYRSNAQS
RAFEEALLGEQIPYRVYGGQRFFERAEIKDTLAYLRLVTNRADDAAFERAVNTPTRGIGE
RTLDEVRRRAREEAISLWEAAKRVSEGTGLAARARNAIAGFLLLVEGLQVETDALPLQEK
IDHVLVRSGLREHYANESRGQLDSRTDNLDELVSVASRFVHGDDEESAALSELVAFLSYA
ALEAGEGQAQSGEDGVQLMTLHSAKGLEFPLVFLAGLEEGLFPNTKSSEEPGRLEEERRL
AYVGITRARQKLVLTYAEARRIHGSDMYGIPSRFLREIPGPLVNEVRPRVQVSRPYMPQG
RRNAAMPAMDPAPVKLGANVRHPTFGTGVVIDYEGTGAHARVQVNFDDAGSKWLVLAYAN
LQPA
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctcccacctgctcgacgcgctcaaccccgcccaacgcgaggccgtgaccgcg
gccgccggccactacctcgtgctggccggcgcgggcagcggcaagacccgcgtgctgatg
caccgcatcgcatggttgaacgaagtgatgggcgtgccgccgcacggcatcctcgcggtc
accttcaccaacaaggccgccggcgagctgagacatcgcgcagagcacctgctgcgcaac
ggatcgcgcggcatgtggatcggcaccttccacggcctcgcccatcgcctgctgcgcctg
cactggcaggacgccggtttgccggaaggcttccaggtgctggattcggacgaccagctg
cgcctcgtcaagcgcgtggtgcaacagctggaactcgacgacacgcggtttccgccgcgg
cagatcgcgtggtggatcaacgcgcagaaggatgaaggccggcgcgccgagaacatccag
ccgggcagcgactggttcatggacacgatgcgcaaggcgtacgcggcctaccaggagcgt
tgcgaacgcgcgggcctggtggatttcgcggagctgctgctgcgcgcgcacgaactgctg
cgcgacaacgcgggcttgctggcgcattaccggcaccggttcggcgaagtgctggtcgac
gaattccaggacaccaatgcgatccagtacggcttcgtgcgcctgctggcgggcgagacg
ggccacgtgttcgtggtcggcgacgacgaccaggcgatctacggctggcgtggcgcgaag
gtcgagaacgtgcagcgtttcctgcgcgactacccgggcgcgaccacgctgcgcctggaa
cagaactaccgctccacgtccaacatcctcaacgccgccaacgcggtgatcgcgcacaac
cccgatcgcctcggcaaacagctgtggaccgacgccggcgaaggcgagccgatcgacctg
tacgcggcgtacaacgaaatcgacgaagcccgcttcgtcgtcgaacgcatccgcgcctgg
gtgcgcgacggcggcagccacggcgagtgcgcgatcctctatcgcagcaacgcgcagtcg
cgtgcgttcgaagaagccttgctcggcgaacagatcccgtaccgcgtgtacggcgggcag
cgcttcttcgagcgcgcggaaatcaaggacacgctggcgtacctgcgcctggtgaccaat
cgcgcggacgatgccgccttcgagcgcgcggtgaacaccccgacccgcggcatcggcgag
cgcacgctggacgaagtgcgtcgtcgcgcgcgcgaagaggcgatctcgttgtgggaagcg
gccaagcgcgtctccgaaggcacgggcctggcggcgcgcgcgcgcaacgcgatcgcgggg
ttcctgctgctggtcgaaggcctgcaggtggaaaccgacgccttgccgctgcaggagaag
atcgaccacgtgctggtgcgcagcggcctgcgcgagcactacgcgaacgaatcacgcggc
cagctggattcgcgcaccgacaacctcgacgaactcgtgtcggtcgcctcgcgcttcgtg
catggcgacgacgaggaatcggcggcgttgagcgagctcgtcgcgttcctcagctacgcc
gcgctggaagcgggcgagggccaggcgcaatccggcgaggacggcgtgcagctgatgacg
ctgcacagcgcgaaggggctggaattcccgctggtgttcctcgccggcctggaagaaggc
ctgttccccaacacgaagtcctccgaggagcccggtcgcctcgaggaagaacggcgcctg
gcgtacgtcggcatcacgcgtgcgcggcagaagctcgtactcacgtatgccgaggcgcgg
cgcatccacggctcggacatgtacgggatcccctcgcgcttcctgcgcgagatccccggc
ccgctggtgaacgaagtgcggccgcgcgtgcaggtctcgcgtccctacatgccgcagggg
cggcgcaacgcggcgatgccggcgatggatccggcgcccgtgaagctcggcgccaacgtg
cgccatccgacgttcggtactggcgtggtcatcgattacgaaggcaccggcgcgcacgca
cgcgtgcaggtcaatttcgacgacgccggttcgaaatggctggtgctggcctacgccaac
ctgcagccggcctga
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