Lysobacter helvus: LYSHEL_12380
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Entry
LYSHEL_12380 CDS
T07483
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
lhx
Lysobacter helvus
Brite
KEGG Orthology (KO) [BR:
lhx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhx03032
]
LYSHEL_12380 (gyrB)
03400 DNA repair and recombination proteins [BR:
lhx03400
]
LYSHEL_12380 (gyrB)
Enzymes [BR:
lhx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LYSHEL_12380 (gyrB)
DNA replication proteins [BR:
lhx03032
]
Prokaryotic type
DNA Topoisomerases
LYSHEL_12380 (gyrB)
DNA repair and recombination proteins [BR:
lhx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LYSHEL_12380 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
HATPase_c
Toprim
GyrB_hook
HATPase_c_3
Toprim_4
UFD1_N2
Motif
Other DBs
NCBI-ProteinID:
BCT95367
UniProt:
A0ABM7QCR8
LinkDB
All DBs
Position
complement(1278788..1281259)
Genome browser
AA seq
823 aa
AA seq
DB search
MSQQEHDAGEMPSVPNSTYDSSKITVLRGLEAVRKRPGMYIGDVHDGTGLHHMVFEVVDN
SIDEALAGHATEVNVTLHEDNSVSVSDNGRGIPVDIHKEEGISAAEVILTVLHAGGKFDD
NSYKVSGGLHGVGVSVVNALSEHLWLDIWRDGHHYQQEYALGESLYPLKQLEASPKRGTL
LRFKPASAIFTDVEFHYDILAKRLRELSFLNSGVRITLTDLRVREDGSEGKRDVFEYEGG
IRSFVEHLAQLKTPLHPNVISVSGEMNGITVDVALQWTDSYQETMFCFTNNIPQKDGGTH
LIGFRAALTRTLSNYIEQNGIAKQAKITLSGDDMREGMIAVLSVKVPDPSFSSQTKEKLV
SSEVRPVVESTFGARLEEFLQEHPNEARAIAGKIVDAARAREAARKARDLTRRKGALDIA
GLPGKLADCQEKDPALSELFIVEGDSAGGSAKQGRNRKTQAILPLKGKILNVERARFDRM
LASAEVGTLITALGTGIGKDEYNPDKLRYHRIILMTDADVDGSHIRTLLLTFFYRQMPEL
IERGHIYIGLPPLYKIKQGKNELYLKDDAALDVYLANNAVDGATLIPADGEPPIDGAGLE
KLLLAYAGARDAISRNAHRYESALLESLIDFVPLDAAQLADPDALRPQLDALEQRLNKGG
LGKPRYRLEVHGATEARPAALVMRRMHMGEELVQILPVAAFETGELRSVREAATMLHGLV
RDGAQIVRGNRAQPIARFADAQAWLMDEAKKGRQIQRFKGLGEMNPEQLWDTTVNPETRR
LLQVRIEDAVAADQIFSTLMGDVVEPRREFIEDNALKVANLDV
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagcaagagcacgatgcgggcgaaatgcccagcgttccgaacagcacgtacgac
tccagcaaaatcaccgtcctgcgcggcctcgaggccgttcgcaagcgtcccggcatgtac
atcggcgacgtgcacgacggcaccggcctgcaccacatggtgttcgaggtcgtcgacaac
tcgatcgacgaagcgctcgccggccacgcgacggaagtcaacgtcacgctgcacgaagac
aactccgtgtcggtgtcagacaacgggcgcggcattcccgtggacatccacaaggaagag
ggcatttccgcggcggaagtgatcctcaccgtgctgcacgcgggcggcaagttcgacgac
aacagttacaaggtgtcgggcggcttgcacggcgtgggcgtgtcggtcgtcaacgcgctg
tccgagcacctgtggctcgacatctggcgcgacggccaccactaccagcaggaatacgca
ctcggcgaatcgctgtatccgctgaagcaactcgaggcctcgcccaagcgcggcacgctg
ctgcgcttcaagccggccagcgcgatcttcaccgacgtcgaattccactacgacatcctg
gccaagcgcctgcgcgaactgtcgttcctcaactccggcgtgcgcatcacgctgaccgac
ctgcgcgtgcgcgaggacggcagcgagggcaagcgcgacgtgttcgagtacgagggcggc
atccgctccttcgtcgagcacctggcgcagctcaagacgccgttgcaccccaacgtgatc
tccgtgtccggcgaaatgaacggcatcacggtggacgtcgcgctgcagtggacggactcg
taccaggaaacgatgttctgcttcaccaacaacatcccgcagaaggatggcggcacgcat
ctcatcggcttccgtgccgcactcacgcgcacgctgtcgaactacatcgaacagaacggc
atcgccaagcaggccaagatcacgctgtcgggcgacgacatgcgcgaaggcatgatcgcc
gtgctgtcggtgaaagtgccggatcccagcttctcgtcgcagaccaaggagaagctggtc
tcgtccgaggttcgccccgtcgttgagagcacgttcggtgcacgtttggaggagttcctg
caggaacaccccaacgaggcccgcgccatcgccggcaagatcgtcgacgccgcccgcgcc
cgcgaagccgcccgaaaggcccgcgacctgacgcgccgcaagggcgcgctcgatatcgcc
ggcctgcccggcaagctcgccgactgccaggaaaaggatcccgcgctctccgaactcttc
atcgtcgagggtgactcggcgggtggctcggcgaagcagggccgcaaccgcaagacccag
gcgatcctcccgctgaagggcaagatcctcaacgtggaacgcgcgcgcttcgaccgcatg
ctcgccagcgcggaagtcggcacgctgatcaccgcgctcggcaccggcatcggcaaggac
gaatacaacccggacaagctgcgctaccaccgcatcatcctgatgaccgacgccgacgtg
gacggctcgcacatccgcacgctgctgctgacgttcttctatcgacagatgccggagctg
atcgagcgcggccacatctacatcggcctgccgccgctgtacaagatcaagcagggcaag
aacgagttgtacctgaaggacgatgcggcgctcgacgtctacctggcgaacaacgcggtc
gacggcgcaacgctcatccccgccgacggcgaaccgccgatcgacggcgcaggcctcgag
aagttgctgcttgcctacgccggcgcgcgcgatgcgatctcccgcaacgcgcatcgctac
gagtccgcgctgctggaatcgctgatcgatttcgtgccgctggatgccgcgcaactcgcc
gatccggacgcgctgcgcccgcagctcgacgcgctcgaacagcgcctcaacaagggtggc
ctgggcaaaccgcgctatcgcctcgaagtgcacggcgccaccgaagcgcgtccggccgcg
ctcgtcatgcgtcgcatgcacatgggcgaagagctggtgcagatcctccccgtcgccgcg
ttcgaaaccggcgagctgcgttcggtgcgcgaagccgcgacaatgctgcacggcctggtg
cgcgacggcgcgcagatcgtgcgtggcaatcgcgcgcaaccgatcgcgcgcttcgccgat
gcgcaggcatggctgatggacgaagcgaaaaagggtcgccagatccagcgcttcaagggc
ctcggcgaaatgaatcccgagcagttgtgggacacgacggtcaatccggaaacgcgtcgc
ctcctgcaggtgcgcatcgaggacgccgtcgccgcggaccagatcttctcgacgctcatg
ggcgacgttgtcgaaccgcgtcgcgagttcatcgaagacaacgcgttgaaggtcgccaac
ctcgacgtgtga
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