Lysobacter helvus: LYSHEL_12400
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Entry
LYSHEL_12400 CDS
T07483
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
lhx
Lysobacter helvus
Pathway
lhx03030
DNA replication
lhx03430
Mismatch repair
lhx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lhx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LYSHEL_12400 (dnaN)
03430 Mismatch repair
LYSHEL_12400 (dnaN)
03440 Homologous recombination
LYSHEL_12400 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhx03032
]
LYSHEL_12400 (dnaN)
03400 DNA repair and recombination proteins [BR:
lhx03400
]
LYSHEL_12400 (dnaN)
Enzymes [BR:
lhx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LYSHEL_12400 (dnaN)
DNA replication proteins [BR:
lhx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LYSHEL_12400 (dnaN)
DNA repair and recombination proteins [BR:
lhx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LYSHEL_12400 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
DUF6212
Amino_oxidase
Tcp10_C
Motif
Other DBs
NCBI-ProteinID:
BCT95369
LinkDB
All DBs
Position
complement(1282551..1283651)
Genome browser
AA seq
366 aa
AA seq
DB search
MRFSLQREVFLKPLAQVVNVVERRQTLPVLANLLVQVKQGQLSLTGTDLEVEMVARHAVD
DAQDGETTIPARKLFEIVRALPDGSKVTVSQSGDKITVSAGRSRFTLASLPANDFPSVDE
VEATERVRVPEAGLKELIERTAFAMAQQDVRYYLNGLLFDLRDKSLRCVATDGHRLALCE
LPLEGGAQSKRQIIVPRKGVQELQRLLEGGDRELELEVGRSHIRVKRDDVTFTSKLIDGR
FPDYEAVIPIGADREVKVDREVLRAALQRAAILSNEKYRGVRVEVSPGQLRINAHNPEQE
EAQEEIEADTRVDGLAIGFNVNYLLDALSALRDEQVVLQLRDANSSALVREAGNEKCRHV
VMPLRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcagcctgcaacgcgaagtcttcctgaagccgttggcgcaagtcgtcaatgtc
gtcgaacgtcgccagaccttgccggtccttgccaacctgctggtgcaggtcaagcagggc
cagctctcgctgaccggcaccgacctggaagtggaaatggtggcgcgccacgccgtcgac
gatgcgcaggatggggaaaccaccatcccggcacgcaaattgttcgagatcgtccgtgcc
ctgcccgatggcagcaaggtcacggtctcgcagtccggcgacaagatcacagtgtcggcg
ggtcgcagccggttcacgctggccagcctgccggccaacgatttcccgtcggtcgatgaa
gtcgaagccaccgagcgcgtgcgcgtgccggaggccgggctgaaggaactgatcgaacgc
accgcgttcgcgatggcccagcaggacgtgcgctattacctcaacggcttgctgttcgac
ctgcgcgacaagtcgctgcgctgcgtggccaccgatggccatcgcctggcgttgtgcgag
ttgccgctcgagggcggtgcgcagtccaagcgccagatcatcgtgccgcgcaagggcgtg
caggaattgcagcgcctgctggaaggcggcgaccgcgagctcgaactcgaagtcggccgc
agccacatccgcgtcaagcgcgacgatgtgacgttcaccagcaagctgatcgacggccgt
ttcccggattacgaagcggtgatcccgatcggtgcggaccgcgaggtcaaggtcgatcgc
gaagtcctgcgtgcggccctgcagcgcgcagccatcctgtcgaacgagaagtaccgcggc
gtccgcgtcgaggtatccccgggccagctgcgcatcaacgcgcacaacccggagcaggaa
gaagcgcaggaagagatcgaagccgatacgcgcgtcgacggcctggcgatcggtttcaac
gtcaattacctgctggatgcgctgtcggcattgcgcgacgagcaggtcgtcctccagctg
cgcgacgccaactcttccgccctcgtccgcgaggcgggcaacgagaagtgccgccacgtg
gtgatgccgctccggctctga
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