Lysobacter helvus: LYSHEL_12620
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Entry
LYSHEL_12620 CDS
T07483
Symbol
icd_2
Name
(GenBank) isocitrate dehydrogenase, NADP-dependent
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
lhx
Lysobacter helvus
Pathway
lhx00020
Citrate cycle (TCA cycle)
lhx00480
Glutathione metabolism
lhx00720
Other carbon fixation pathways
lhx01100
Metabolic pathways
lhx01110
Biosynthesis of secondary metabolites
lhx01120
Microbial metabolism in diverse environments
lhx01200
Carbon metabolism
lhx01210
2-Oxocarboxylic acid metabolism
lhx01230
Biosynthesis of amino acids
lhx04146
Peroxisome
Module
lhx_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lhx_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
lhx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LYSHEL_12620 (icd_2)
09102 Energy metabolism
00720 Other carbon fixation pathways
LYSHEL_12620 (icd_2)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
LYSHEL_12620 (icd_2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LYSHEL_12620 (icd_2)
Enzymes [BR:
lhx01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
LYSHEL_12620 (icd_2)
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Gene cluster
GFIT
Motif
Pfam:
IDH
CAMP_factor
DUF3322
DUF1843
Motif
Other DBs
NCBI-ProteinID:
BCT95391
UniProt:
A0ABM7QCW6
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All DBs
Position
complement(1304664..1306895)
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AA seq
743 aa
AA seq
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MSKSPKILYTLTDEAPFLATQSLLPIVAAFAGTAGIAVETRDISLAARILALFPEVLDAS
QRVNDDLAELGTLATTPEANIIKLPNISASVPQLKAAIRELQQQGFKLPDYPEEPKDDAQ
ADIKARYDRTKGSAVNPVLREGNSDRRAPLSVKQYARKHPHRMGKWASDSKSHVAHMDEG
DFYGSERSATIANAGALRIEFVGADGSTKVLKDKVKVQAGEIVDGAVMRAKALARFVDAQ
IEDAKAQGVLFSLHLKATMMKVSDPIMFGVVVERFYRDVLARHEDALVQAGFDPNNGIGD
LYARLPSLPEDLRKAIEADIAAEYAQRPGLAMVNSDKGITNLHVPSDVIVDASMPAMIRD
SGRMWNAKGELQDTKAVIPDRCYAGIYQAVIDDCKAHGAFDPATMGSVPNVGLMAQKAEE
YGSHDKTFHLDADGTVRVVDDAGKVVFEHAVEAGDIWRMCQTKDAPIRDWVKLAVSRARL
SHTPAVFWLDEKRAHDAQVIAKVNAYLRDHDTNGLDLRILPPVEAMLFSLARIRKGEDTI
SVTGNVLRDYLTDLFPIMELGTSAKMLSVVPLMAGGGLFETGAGGSAPKHVQQFTAENYL
RWDSLGEFLALAASLEHLAEKYGDKRAQVLADALDAANAQFLESDRSPSRKIGGLDNRGS
HFYLAMYWAQALAAQDDDAGLKALFAPLAKTLAENEQKIVGELAAVQGSPVDIGGYYRPD
MQKLATAMRPSATLNAALASLGK
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagtccccgaagatcctctacacgctcaccgacgaggcgccgttcctggcgacg
cagtcgctgctgcccatcgtcgctgcgttcgccggcaccgccggcatcgccgtggaaacg
cgcgacatctcgctcgccgcgcgcatcctcgcgctcttccccgaagtgctcgacgcctcg
cagcgcgtgaacgacgacctcgccgaactcggcacgctcgccaccacgccggaagccaac
atcatcaagctgccgaacatcagcgcctcggtgccgcagctcaaggccgcgatccgcgag
ttgcagcagcagggcttcaagctgccggactatccggaagaaccgaaggacgacgcgcag
gccgacatcaaggcgcgctacgaccgcaccaagggcagcgcggtgaaccccgtgctgcgc
gaaggcaactccgatcgccgcgcaccgctgtcggtcaagcagtacgcgcgcaagcatccg
catcgcatgggcaagtgggccagcgattccaagtcgcacgtcgcgcacatggacgaaggc
gatttctacggcagcgagcggtcggccacgatcgccaacgccggcgccctgcgcatcgaa
ttcgtcggcgccgacggcagcacgaaggtgctcaaggacaaggtgaaggtgcaggccggc
gagatcgtcgacggcgcggtgatgcgcgccaaggcgctcgcgcgcttcgtcgatgcgcag
atcgaggacgcgaaggcgcagggcgtgctgttctcgctgcacctgaaggccacgatgatg
aaggtctccgacccgatcatgttcggcgtggtcgtcgagcggttctaccgcgacgtgctg
gcgcgccacgaagatgcgctggtgcaggcgggtttcgatcccaacaacggcatcggcgat
ctgtacgcgcgcctgccctcgttgccggaagacctgcgcaaggccatcgaagccgacatc
gccgccgaatacgcgcagcgcccgggcctggcgatggtgaattccgacaagggcatcacc
aacctgcacgtgccgagcgacgtgatcgtcgatgcctcgatgcccgcgatgatccgcgac
tccggccgcatgtggaacgcgaagggcgagctgcaggacaccaaggccgtcatccccgat
cgctgctatgccggcatctaccaggcggtgatcgacgactgcaaggcgcacggcgcgttc
gatcccgcgacgatgggcagcgtgcccaacgtcgggctgatggcgcagaaggccgaggaa
tacggttcgcacgacaagacgttccacctcgacgccgacggcaccgtgcgcgtggtcgac
gacgcgggcaaggtggtgttcgaacacgcggtggaagccggcgacatctggcgcatgtgc
cagaccaaggacgcgccgatccgcgactgggtgaagctcgccgtttcgcgcgcgcgcctg
agccacacgccggcggtgttctggctggacgaaaagcgcgcgcacgacgcgcaggtgatc
gcgaaggtcaacgcgtacctgagggaccacgacaccaatggcctggatctgcgcatcctg
ccgccggtggaggcgatgctgttctcgctcgcgcgcatccggaagggcgaagacacgatc
tccgtcaccggcaacgtgttgcgcgattacctcaccgacctgttcccgatcatggaactg
ggcaccagcgcgaagatgctgtcggtcgtgccgctgatggcaggcggtggcttgttcgaa
accggcgcgggcggttcggcgccgaagcacgtgcagcagttcacggcggagaattacctg
cgctgggattcgctcggcgaattcctcgcgctggccgcgtcgctggaacacctcgccgag
aagtacggcgacaagcgcgcgcaggtgctggccgatgcgctggatgcggccaatgcgcag
ttcctggaaagcgatcgttcgccgtcgcgcaagatcggcggcctcgacaatcgcggcagc
cacttctacctcgcgatgtactgggcgcaggcgttggcggcacaggacgacgatgcgggc
ctgaaggcgctgttcgcgccgctggcgaagacgctggcggagaacgaacagaagatcgtc
ggcgagctggcggcggtgcagggctcgccggtcgacatcggcgggtattaccggccggac
atgcagaagctggcgacggcgatgcggccgagtgcgacgttgaacgctgcgttggcttcg
ctcgggaagtaa
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