Lysobacter helvus: LYSHEL_12940
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Entry
LYSHEL_12940 CDS
T07483
Symbol
recC
Name
(GenBank) RecBCD enzyme subunit RecC
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
lhx
Lysobacter helvus
Pathway
lhx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lhx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LYSHEL_12940 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhx03400
]
LYSHEL_12940 (recC)
Enzymes [BR:
lhx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LYSHEL_12940 (recC)
DNA repair and recombination proteins [BR:
lhx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LYSHEL_12940 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
BCT95423
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All DBs
Position
1338403..1341774
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AA seq
1123 aa
AA seq
DB search
MQGRPDFRLYHGNALDVLAGLLAAEVAKPPADGDWLRPDIVLVPQFSMRRWLQQALAEAS
GICANLVFLTPGEFVDLALDRNLGPAPPQDRLAPETLRWHVLRELQRHPPAALQRFLDDA
QPRKAWSLATALADTFEKYQAWRRDWLLGWEKRAPRDDWEAALWRAIGRGKAHRARRIDD
YLARFGAGAGEAPTGLPPRLFVFACQNVSPDVLQVIASQSHAGTQHFYLHSPARGFWGDL
ARWSDYAPGADDAYLALGDAQPNPLLAAWGQAGRDFVAMLVGGEAVQPAFDLAPFVEPTR
TTLLGRMQADLLDNRAPLQDANDAAWPRATVDARDPSLQFHACHTRLREVQVLHDQLRAL
LDAWPADGNPPLQPRDIAVLAPDIDAYAPHIEAVFGGALGTARELPYTIADTSPLASAPI
AEAFLRLLELPLRAPSTADVLDLLAVPAIAARFDLEDADRARVQDWLESAGARWGLDGDD
RQRHGADGNAYTLEFAIERLLLGYASGADDDIAGIAPWPELEGQAAETLDALLRCVDMLR
SARTRLAGPHPPATWATVLQRLLDDAFAPPRDSADAQLLRRLRDAIARFTEGAATAGYDA
PVEHAVVLDHLRTELGTSDARAPFLSGGICFGRMVPMRLIPFRAIWLLGMDADAFPAREG
RDPVNRLANALSTPERRTGDPSRRDADRYLFLQLFASSGRVFAMSWCGMDPRDNSRREPS
TLVTELLDAAAAYHAVETAKVREALVVRHALQPFSPGAFGAAHVGEALPQGEPIEPRRFS
YDARWRAASTEASGVDDEPVFAPPTLVLPEREGERGALSLDRLRRSLMRPHAVYLQEGLG
LRLPEDEPPLAEHEPLGAPDALGAYALRHAVFDAWMRANGRPDAHALHARLLARAVVAPG
ADGRAQVAEMLEEIAPFAERALAKGFGDAAARAAFSHASEAGALRGTLDGLHRPGLLRVV
LRPDGQHGGHVIRHGLDALCASLLGKSMHLLARPEKGADPEWIVRKPVSEKRAAAALDAF
FAWHDHAVRAPQVFLPKSGHDFVACLAKKDPASALRAARDTWMGSAFEGIGRAEASPATR
VALRGRDPFYDDDASAQMRFAELSVAIFSALEHATPLDAGMFA
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgcagggacgccccgacttccgcctctaccacggcaatgcgctggacgtgctcgccggg
ctgctggcggccgaagtcgcgaagccgccggccgacggcgactggctgcgccccgacatc
gtcctggtcccgcagttctccatgcgccgctggctgcagcaggcgctggccgaagcgagc
ggcatctgcgccaacctggtgttcctgacgccgggcgaattcgtggacctggcgctcgat
cgcaacctcggccccgcgccgccgcaggaccgcctggccccggagaccctccgctggcac
gtcctgcgcgaactccagcgccaccccccggcggcgttgcagcgcttcctcgacgacgcg
cagccgcgcaaggcctggtcgctcgccaccgcgctggccgatacgttcgagaaataccag
gcctggcgccgcgactggctgctcggctgggagaagcgcgcaccccgcgacgattgggaa
gcggcgttgtggcgcgcgatcggccgcggcaaggcgcatcgcgcgcggcgcatcgacgat
tacctcgcgcgcttcggcgccggtgcgggcgaagcgccgaccggcctgccgccgcgcctg
ttcgtgttcgcgtgccagaacgtctcgcccgacgtgctgcaggtgatcgccagccagtcg
cacgcgggcacgcagcatttctacctgcactcgccggcgcgcggcttctggggcgacctc
gcgcgctggtccgattacgcgccgggcgcggacgatgcgtacctcgcgctcggcgacgcg
caacccaatccgttgctcgccgcgtggggccaggccggccgcgatttcgtcgcgatgctc
gtcggcggcgaggcggtgcagcccgcgttcgacctcgcaccgttcgtcgaacccacgcgc
accacgctgctcgggcgcatgcaggccgacctgctcgacaaccgcgcgcccttgcaggac
gccaacgacgccgcatggccgcgcgcgaccgtggacgcacgcgatccgagcctgcaattc
cacgcctgccacacgcggctgcgcgaagtgcaggtgctgcacgaccagctgcgcgcgctg
ctggacgcttggcccgccgatggcaatccgccgctgcagccgcgcgacatcgccgtcctg
gcgcccgacatcgacgcgtatgcgccgcatatcgaagccgtgttcggcggcgcgctcggc
accgcgcgcgaactgccgtacacgatcgccgacaccagcccgctcgcgagtgcaccgatc
gccgaggcgttcctgcgcttgctcgaactcccgttgcgcgccccatcgaccgccgacgtg
ctcgacctgctcgccgttcccgcgatcgccgcgcgcttcgacctcgaagatgccgaccgc
gcacgcgtgcaggactggctcgaatccgccggcgcgcgctggggcctggacggcgacgac
cgccagcgccacggcgcggacggcaatgcgtacacgctggaattcgcgatcgagcgcctg
ctgctcggttacgcgagcggcgccgacgacgacatcgccggcatcgcgccgtggcccgag
ctcgaaggccaggccgcggaaaccctcgacgcgctgttgcgctgcgtcgacatgctgcgc
agcgcgcgcacgcgcctggccggtccgcatccgccggccacgtgggccaccgtgctgcag
cgcctgctggacgacgcgttcgcaccgccgcgcgacagcgccgatgcgcaactgttgcgc
cgcctgcgcgatgcgatcgcgcgattcaccgaaggcgccgccaccgcgggctacgacgcg
ccggtcgaacacgccgtcgtgctcgaccacctgcgcaccgaactcggcaccagcgatgcg
cgcgcgccgttcctgtcgggcggcatctgcttcggccgcatggtgccgatgcgcctgatc
ccgttccgcgcgatctggctgctgggcatggacgccgacgccttccccgcgcgcgaaggc
cgcgatcccgtcaatcgcctcgccaacgcgttgtcgacgccggagcggcgcacgggcgat
ccctcgcggcgcgatgcggatcgttacctgttcctgcaattgttcgcctcgtccggccgc
gtcttcgcgatgagttggtgcggcatggatccgcgcgacaacagccggcgcgagccgtcg
acgctggtgaccgaattgctcgacgcggccgccgcataccacgcggtcgaaacggcaaag
gtgcgcgaggccctcgtcgtgcggcatgcgttgcagccgttctcgccgggcgcattcggt
gcggcgcatgtcggggaagcgttgccgcagggcgagcccatcgaaccgcgccgcttcagt
tacgacgcgcgctggcgggcggcgtccacggaagcctcgggcgtggacgacgaacccgtg
ttcgcgccgcccacgttggtgctgcccgaacgcgaaggcgagcgcggtgcgttgtcgctc
gatcgcctgcgtcgctcgctgatgcgcccgcacgccgtgtacctgcaggaaggtctcggc
ctgcgcctgccggaagacgaaccacccttggccgaacacgaaccgctcggcgcgcccgac
gcgctcggtgcctatgcgttgcgccacgcggtgttcgatgcgtggatgcgcgcgaacggg
cggcccgatgcgcatgcgctgcatgcacgcttgctcgcacgcgccgtcgtcgcgcccggc
gcggatggccgcgcgcaggtcgcggagatgctggaggaaatcgcgccgttcgcggaacgc
gcactcgcgaagggcttcggtgacgccgccgcgcgcgccgcgttttcgcatgcgtcggag
gccggcgcattgcgcggcacgctcgacggcctgcatcgcccgggtttgctgcgcgtggtg
ctgcgtcccgacggccagcacggcgggcacgtgatccgccatgggctcgatgcgctgtgc
gcgtcgttgctgggcaagtcgatgcatctgctggcccgcccggagaaaggcgccgatccc
gaatggatcgtacgcaagccggtgtccgagaagcgcgccgctgccgcactcgacgccttc
ttcgcctggcacgaccacgcagtgcgcgcgccgcaggtgttcctgccgaagagtggccac
gacttcgtcgcatgcctggcgaagaaggacccggcgtccgcattgcgcgccgcgcgcgat
acctggatgggcagtgcgttcgaaggcatcggccgtgccgaagcctcgcccgccacgcgc
gttgcgttgcgcggccgcgatccgttctacgacgacgacgcgagcgcgcagatgcgtttc
gccgaactctcggtcgcgatcttcagcgcgctggaacacgccacgccgctggacgcgggg
atgttcgcgtga
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