Lysobacter helvus: LYSHEL_14050
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Entry
LYSHEL_14050 CDS
T07483
Symbol
exoA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
lhx
Lysobacter helvus
Pathway
lhx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lhx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LYSHEL_14050 (exoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhx03400
]
LYSHEL_14050 (exoA)
Enzymes [BR:
lhx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LYSHEL_14050 (exoA)
DNA repair and recombination proteins [BR:
lhx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LYSHEL_14050 (exoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
BCT95534
LinkDB
All DBs
Position
1463652..1464425
Genome browser
AA seq
257 aa
AA seq
DB search
MRIVSFNANGVRSAASKGFFDWFAGQDADVLCLQETKAQEHQISGPDFVPEGYRAWYRDA
STKKGYSGVAIYARRQPDEVRTGLGWAPFDDEGRYIEARFGNLSVVSFYIPSGSSGELRQ
GFKFEVMEWLRPILHHWLHSGRDYVLCGDWNIVRSELDIRNWKSNQKNSGCLPRERDWLN
DLCADTHGWVDAYRALHADGQDYTWWSNRGAARAKNVGWRIDYQFCTPSLRDKLRACAIH
PSPRFSDHAPFVVDYAL
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgtcagcttcaacgccaacggcgtccgctcggccgccagcaaggggttcttc
gattggttcgccggccaggacgcggatgtcctgtgcctgcaggaaaccaaggcgcaggag
caccagatctccgggcccgacttcgtgcccgagggctatcgtgcgtggtaccgcgacgcc
tcgacgaagaagggctacagcggcgtggcgatctatgcgcgccgccagcccgacgaggtg
cgcacgggcctgggctgggcgccgttcgacgatgaagggcgctacatcgaggcacgcttc
gggaacttgagcgtggtgtcgttctacatcccttcgggatcgtcgggcgaactgcgccag
ggcttcaaattcgaagtgatggagtggctgcggccgatcctccaccactggctgcacagc
ggccgcgactacgtgctgtgcggcgactggaacatcgtgcgcagcgaactggacatccgg
aactggaagtccaaccagaagaattccggctgcctgccgcgcgaacgcgactggctcaac
gacctgtgcgccgacacccacggctgggtggacgcgtaccgcgcgctgcacgccgacggc
caggactacacctggtggagcaaccgcggcgcggcgcgcgcgaagaacgtggggtggcgc
atcgattaccagttctgcacgccgtcgctgcgggacaagttgcgggcgtgcgcgatccat
ccgtcgccgcggttctcggaccacgcgccgttcgtcgtggattacgcgttgtga
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