Lysobacter helvus: LYSHEL_17720
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Entry
LYSHEL_17720 CDS
T07483
Symbol
rimK
Name
(GenBank) putative alpha-L-glutamate ligase
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
lhx
Lysobacter helvus
Brite
KEGG Orthology (KO) [BR:
lhx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lhx03009
]
LYSHEL_17720 (rimK)
Ribosome biogenesis [BR:
lhx03009
]
Prokaryotic type
ribosomal protein modification factors
LYSHEL_17720 (rimK)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RimK
Rimk_N
GSH-S_ATP
ATPgrasp_ST
ATP-grasp_3
ATPgrasp_YheCD
R2K_3
Dala_Dala_lig_C
Motif
Other DBs
NCBI-ProteinID:
BCT95901
LinkDB
All DBs
Position
1841997..1842914
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AA seq
305 aa
AA seq
DB search
MKLAILSRNGKLYSTRRLVEAARERGHSVRVLDPLRCYMRIASDGFAMHHQGRPLTGYHA
VIPRIGASVTRYGTAVLRQFELMGTFTPNPSDSILKARDKLRCHQLLAAQGLGLPATVFG
DNPDDTSDLLAMLGPTPHVIKLNEGTQGAGVMLTEKLSASRSVIEALRGLYANFLVQEFV
AEAKGADLRCFVVGGKVVATMKRQAPKGDFRSNLHRGGTAKAVTATAAEEDTAIRAAKLL
GLGVAGVDLIRSQRGPLILEVNASPGLEGIEAASGVDIAGSIIECVAIGGKKPTTHAGRG
LLRQA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgcgatcctctcgcgcaacggcaagctctactcgacgcgccgcctcgtcgag
gccgcgcgcgagcgtggccacagcgtgcgcgtcctcgatcccctgcgctgctacatgcgc
atcgcctccgacggcttcgcgatgcaccaccaggggcggccgctcaccggctaccacgcg
gtgatcccgcgcatcggcgcctcggtcacgcgctacggcacggcggtgctgcggcagttc
gaactgatgggtacgttcacgcccaatccgtccgattcgatcctcaaggcgcgcgacaag
ctgcgctgccaccagctgctcgccgcgcagggcctgggcctgccggccacggtgttcggc
gacaaccccgacgacaccagcgacctgctcgcgatgctcggccccacgccgcacgtcatc
aagctcaacgaaggcacgcagggcgcgggcgtgatgctcacggaaaaactgtcggcgtcg
cgcagcgtgatcgaagcgttgcgcggcctgtacgccaacttcctggtgcaggagttcgtc
gccgaagcgaagggcgcggacctgcggtgcttcgtcgtcggcggcaaggtcgtcgccacg
atgaaacgccaggcaccgaagggcgatttccgttccaacctgcatcgcggcggcaccgcg
aaggcggtgactgcaaccgcggccgaggaagacaccgccatccgggcggcgaagctcctc
gggctgggggtggcgggcgtggacctgatccggtcccagcgcgggccgctgatcctggag
gtcaacgcgtccccgggcctggaaggcatcgaggccgccagcggcgtcgatattgcaggg
agcatcatcgaatgcgtggcgatcggcggcaaaaagccgacaacgcacgcgggccggggt
ctcctgcgccaagcgtga
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