Lysobacter helvus: LYSHEL_18860
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Entry
LYSHEL_18860 CDS
T07483
Symbol
nifS
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
lhx
Lysobacter helvus
Pathway
lhx00450
Selenocompound metabolism
lhx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lhx00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LYSHEL_18860 (nifS)
Enzymes [BR:
lhx01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
LYSHEL_18860 (nifS)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
LYSHEL_18860 (nifS)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
Taq-exonuc
Motif
Other DBs
NCBI-ProteinID:
BCT96015
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All DBs
Position
complement(1960619..1961857)
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AA seq
412 aa
AA seq
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MKTETPTLAPDWDRIRADFPLLAREVHGKPLVYFDSANTGQKPAVVIEAVDAFYRRHNAN
VSRAVHALGAEATEAYEGTRARLAQHLNVAREDLVLTSGTTFALNLVAYSWALPRLQPGD
VVLLTRMEHHANIVPWQLICERTGATIRVADLAPDGSLDLDALYALMAPDVKLLGIAHVS
NVLGTVNPVAEICREARKRGIVTVVDGSQALPHMAVDIASIGCDFYAFTGHKMCGPTGTG
ALWARREHLLAMPPFLGGGEMIKEVRYEGTVFAEPPHRFEAGTPNIAGHVGLGTAVGYLD
GIGMDAIAAREGDLLAHLTEEMDRVEGLRILGRAPRKAAVVSFLVEGAHAHDLATLLDLE
GVAVRSGHHCAHPLMAFLGVPATCRASLAFYNTHAEIEAFIAALRKVRRLLG
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacggaaacaccgacgctcgcgcccgactgggaccgcatccgcgccgacttcccg
ctgctcgcgcgggaagtgcacggcaagccgctggtgtatttcgattcggcgaacacgggg
cagaagccggccgtcgtgatcgaggcggtggatgcgttctaccgccgccacaacgcaaac
gtgagccgcgcggtgcatgcgttgggtgccgaagccacggaagcgtacgaaggcacgcgc
gcgcgcctggcgcagcacctcaacgtggcgcgcgaggatctcgtgctcaccagcggcacg
acgttcgcgctcaacctggtcgcgtattcgtgggcactgccgcggttgcagcccggggat
gtcgtgctgctgacgcggatggagcaccacgcgaacatcgtgccgtggcagctcatctgc
gagcgcaccggtgcgacgatccgcgtcgccgacctcgcgcccgacggctcgctcgacctc
gacgcgctgtacgcgttgatggcgccggacgtgaagctgctcggcatcgcgcacgtgtcg
aacgtgctgggcacggtgaatccggtcgccgagatctgccgagaagcacgcaaacgcggc
atcgtcaccgtcgtcgatgggtcgcaggcgctgccgcacatggcggtggacatcgcgtcg
atcggctgcgacttctacgccttcaccggccacaagatgtgcgggcccacgggcacgggc
gcgctgtgggcgcgtcgcgaacacctgctggcgatgccgcccttcctcggcggcggcgag
atgatcaaggaagtgcgttacgaaggcacggtgttcgccgagccgccgcatcgcttcgaa
gcgggcacgccgaacatcgcggggcacgtggggctgggcacggcagtcggctatctcgac
ggcatcggcatggacgcgatcgccgcgcgcgaaggcgatttgctcgcgcacctcaccgaa
gaaatggatcgcgtcgaaggcctgcgcatcctggggcgcgcgccgcgcaaggccgcggtg
gtgtcgttcctggtcgaaggcgcgcatgcgcacgacctcgccacgctgctcgacctggaa
ggcgtcgccgtgcgctcgggccaccattgcgcgcatccgctgatggccttcctcggcgtg
ccggccacgtgccgcgcgtcgctggccttctacaacacgcatgccgagatcgaggcgttc
atcgccgcgctgcgcaaggtgcggcgcctgctcggctag
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