Lysobacter helvus: LYSHEL_20100
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Entry
LYSHEL_20100 CDS
T07483
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
lhx
Lysobacter helvus
Pathway
lhx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lhx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LYSHEL_20100 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhx03400
]
LYSHEL_20100 (uvrB)
DNA repair and recombination proteins [BR:
lhx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LYSHEL_20100 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LYSHEL_20100 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
DUF87
AAA_22
AAA_5
Cytokin_check_N
Motif
Other DBs
NCBI-ProteinID:
BCT96139
UniProt:
A0ABM7QEX2
LinkDB
All DBs
Position
2099836..2101884
Genome browser
AA seq
682 aa
AA seq
DB search
MPRPEPPSDHTKFQLVAPYTPAGDQPQAIEKLVQGFESGLAKQTLLGVTGSGKTYTVANL
IQAVQKPTLVMAPNKTLAAQLYGEFKAFFPHNAVEYFVSYYDYYQPEAYVPSSDTYIEKD
SSINEHIEQMRLSATKALLERRDAIIVCTVSAIYGLGDPNEYFNMVLHMVRGERIDQREL
IRRLTEMQYTRNEFELQRGHYRVRGETIDVHPAESDMEALRIELFDGEIETLSLFDPLTG
EVMRKVPRYTIYPKSHYVTTRPTVLNAVEGIKAELRERLEQLYAQNKLVEAQRLQQRTQY
DLEMLSEVGYCNGIENYSRYLTGRMPGEPPPCLFDYLAPDALLIVDESHVTVPQIGAMYK
GDRSRKETLVEFGFRMPSALDNRPLKFEEWELRSPRSVYVSATPGPYELRESNGEVVELV
VRPTGLIDPVVEIRPVATQVDDLLSEANLRIAMGDRVLVTTLTKRMAENLTEYLGEHGIR
VRYLHSDVDTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSG
GSLIQTIGRAARNLRGKAILYADRITKSMQHAIDETDRRRARQVEYNAEHGIVPRSVAKP
IVDILEGARTEPGGERKKGKGRTAAAVAEDNADYTVLNPAQAAAKLKALEAKMYQHARDL
EFEDAARVRDQIRKLKDASLAT
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgacccgaaccaccgtccgaccacacgaagttccagctcgtcgcgccgtacacg
cccgcgggcgaccagccgcaggcgatcgagaaattggtgcagggcttcgaatcgggcctg
gcgaagcagacgctgctcggcgtcaccggttcgggcaagacctacacggtcgccaacctg
atccaggcggtgcagaaacccacgctggtgatggcgcccaacaagacgctggccgcgcag
ctgtacggcgagttcaaggcgttcttcccgcacaacgcggtcgagtatttcgtcagctac
tacgactactaccagccggaggcctacgtgccttcgtcggacacgtacatcgagaaggac
agctcgatcaacgaacacatcgagcagatgcgcctgtccgccaccaaggcgctgctggaa
cgccgcgacgcgatcatcgtgtgcaccgtgtcggcgatctacggcctgggcgacccgaac
gaatacttcaacatggtcctgcacatggtgcggggcgagcgcatcgaccagcgcgagctg
atccgccgcctcaccgagatgcagtacacgcgcaacgaattcgaactgcagcgcggccac
taccgcgtgcgcggcgagaccatcgacgtgcacccggccgaaagcgacatggaagcgctg
cgcatcgagctgttcgacggcgagatcgaaacgctgtccctcttcgatccgctgacgggc
gaggtgatgcgcaaggtgccgcgctacacgatctacccgaagtcgcactacgtcaccacg
cgccccaccgtgctcaacgcggtggaaggcatcaaggccgaactgcgcgagcgcctggag
cagctgtacgcgcagaacaagctggtcgaagcccagcgcctgcagcagcgcacccagtac
gacctggagatgctgtcggaagtcggctactgcaacggcatcgaaaactattcccgctac
ctcaccgggcgcatgcccggcgagccgccgccgtgcctgttcgattacctcgcgccggat
gcgctgctgatcgtcgacgaatcgcacgtgaccgtcccgcagatcggcgcgatgtacaag
ggcgaccgctcgcgcaaggaaacgctggtggagttcgggttccgcatgccgtcggcgctc
gacaaccgcccgctgaagttcgaggaatgggaattgcgttcgccgcgcagcgtgtacgtg
tccgccacgccgggcccgtacgaattgcgcgaatccaacggggaagtcgtcgaactcgtc
gtgcgccccacgggcctgatcgatcccgtcgtcgagatccgccccgtcgccacgcaggtc
gacgacctgttgagcgaagccaacctgcgcatcgcgatgggcgaccgagttctggtcacc
acgctgaccaagcgcatggcggaaaacctcaccgaatacctcggcgaacacggcatccgc
gtgcggtatttgcattcggacgtcgacaccgtggagcgcgtggagatcatccgcgacctg
cgcctcggcaagttcgacgtgctggtgggcatcaacctgctgcgcgaaggcctcgacatg
ccggaggtctcgctggtggcgatcctcgatgccgacaaggaagggttcctgcggtccggc
gggtcgctgatccagaccatcggccgcgccgcgcgcaacctgcgcggcaaggcgatcctc
tacgccgaccgcatcaccaagtcgatgcagcacgccatcgacgaaaccgatcgccgccgc
gcgcgccaggtggaatacaacgccgagcacgggatcgtgccgcgctccgtcgccaagccc
atcgtcgacatcctggaaggcgcgcgcaccgaaccgggcggcgaacgcaagaagggcaag
ggccgcaccgccgccgccgtggccgaggacaacgccgactacacggtgctcaaccccgcg
caggccgcggcgaagctcaaggcgctggaagcgaagatgtaccagcacgcgcgcgacctg
gagttcgaggacgccgcgcgcgtgcgcgaccagatccgcaagctcaaggacgccagcctg
gcgacctga
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integrated database retrieval system
