Lysobacter helvus: LYSHEL_20950
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Entry
LYSHEL_20950 CDS
T07483
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lhx
Lysobacter helvus
Pathway
lhx03030
DNA replication
lhx03430
Mismatch repair
lhx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lhx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LYSHEL_20950 (holA)
03430 Mismatch repair
LYSHEL_20950 (holA)
03440 Homologous recombination
LYSHEL_20950 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhx03032
]
LYSHEL_20950 (holA)
03400 DNA repair and recombination proteins [BR:
lhx03400
]
LYSHEL_20950 (holA)
Enzymes [BR:
lhx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LYSHEL_20950 (holA)
DNA replication proteins [BR:
lhx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LYSHEL_20950 (holA)
DNA repair and recombination proteins [BR:
lhx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LYSHEL_20950 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
HP_1247_M
DNA_pol3_delt_C
DNA_pol3_delta_C
DUF6596
T3SS_needle_F
Motif
Other DBs
NCBI-ProteinID:
BCT96224
UniProt:
A0ABN6G4K9
LinkDB
All DBs
Position
2184238..2185284
Genome browser
AA seq
348 aa
AA seq
DB search
MSELRPDRLAAQLAAEPLRPAYLVAGPEALVVLEAADAIRAAAREQGIGDREVFDIEGRD
PDWDSLSAAFNAPGLFATRRVVEVRMPTGKPGKEGAEVFTEFAANPPPDVVLLVTCADWS
RQHGGKWSEALGRIGHQVIAWPIKPHELPDWIERRLRARGLRADRDAVQALAERVEGNLL
AAAQEIDKLALLADGNTIDLARMQALVSDSARYDVFRLVDAAMNGEGAQVSRMLHGLRSE
GEAVPALLGMVCMELQRAAALSRVQARGGNLNAEFKAQRIWDSKQAAYTRALQRHDAARW
ERFAAEAGRVDRIAKGRPRWGQDPMDAWIALERVLLAVANPKAMRLLG
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaactccggccggaccggctcgcggcgcaactggcggccgagcccctgcggccc
gcgtacctcgtcgccgggcccgaagccctcgtcgtcctcgaagctgccgacgccatccgc
gccgccgcgcgcgagcagggcatcggcgatcgcgaagtgttcgacatcgaaggccgcgat
cccgactgggattcgttgtccgccgcgttcaatgcgccgggcctgttcgcgacgcgccgc
gtcgtcgaagtgcgcatgcccaccggcaaaccgggcaaggaaggcgcggaagtcttcacc
gaattcgcggccaatccgccgcccgacgtcgtgctgctggtcacctgcgccgactggagc
cgccagcacggcggcaagtggagcgaagcgctgggccgcatcggccaccaggtgatcgcc
tggccgatcaagccgcacgaattgcccgactggatcgaacgccgcctgcgcgcgcgcggc
ctgcgcgccgatcgcgacgcggtgcaggcgctggccgaacgcgtcgaaggcaacttgctc
gccgccgcgcaggaaatcgacaagctggcgttgctcgccgacggcaacacgatcgacctg
gcgcggatgcaggcgctggtgtcggattcggcgcgctacgacgtgttccgcctcgtcgat
gcagcgatgaacggcgagggcgcgcaggtgtcgcgcatgctgcacgggctgcggtccgaa
ggcgaagcggtgcccgccttgctcggcatggtgtgcatggaattgcagcgcgccgcggcg
ctctcgcgcgtgcaggcgcgcggcggcaacctcaacgcggagttcaaggcgcaacgcatc
tgggattcgaagcaggccgcgtacacgcgcgcgttgcagcggcatgacgccgcgcgctgg
gaacgcttcgccgccgaagccgggcgcgtggatcgcatcgcgaaggggcgcccgcgctgg
ggccaggatccgatggatgcgtggatcgcgctcgaacgcgtgctgcttgccgtcgccaat
cccaaagcgatgcggttgctgggctga
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