Lysobacter helvus: LYSHEL_24070
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Entry
LYSHEL_24070 CDS
T07483
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
lhx
Lysobacter helvus
Brite
KEGG Orthology (KO) [BR:
lhx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lhx03009
]
LYSHEL_24070 (rimO)
Enzymes [BR:
lhx01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LYSHEL_24070 (rimO)
Ribosome biogenesis [BR:
lhx03009
]
Prokaryotic type
ribosomal protein modification factors
LYSHEL_24070 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
CLP1_P
PrmA
Motif
Other DBs
NCBI-ProteinID:
BCT96536
UniProt:
A0ABN6G3I0
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All DBs
Position
2516276..2517631
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AA seq
451 aa
AA seq
DB search
MSVISKPKPAATGGRVGFVSLGCPKALVDSERILTQLKVEGYDIVQSYDDADIVVVNTCG
FIDSAVTESLDAIGEALAENGKVIVTGCLGKKPEQIREAHPDVLSISGPQDYQSVMTAVH
AALPPAHDPFLSLVPDTGIKLTPKHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVDDVL
REAEKLAMGGVRELLVISQDTSAYGVDVKYAERTWRGKQYQTRMKTLCEGLSELGLWTRL
HYVYPYPHVDDIIPLMADGKLLPYLDIPFQHASPRILKLMKRPGAVEKTLERIQRWRATC
PELAIRSTFIVGFPGETEAEFETLLDFLDEAQLDRVGAFAYSPVDGATANALPDPVPEAV
KQERLARFMERQAMISADRLEAKVGTVQQCLVDALDGELAIARSRFDAPEIDGLVQIQDG
RDAGLKPGDFVDVEILGSDEHDLFGETSYAA
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcatttccaagccgaaacccgccgccaccgggggccgcgtcggcttcgtcagc
ctcggctgcccgaaggcgctggtcgattccgagcgcatcctcacgcagctgaaggtcgag
ggctacgacatcgtccagtcctacgacgatgccgacatcgtggtggtcaacacctgcggc
ttcatcgactcggcggtcaccgaatcgctcgatgcgatcggcgaggcgctggcggaaaac
ggcaaggtcatcgtcaccgggtgcctgggcaagaagcccgagcagatccgcgaagcgcat
ccggacgtgctgtcgatcagcggcccgcaagattaccagagcgtcatgaccgcggtgcac
gccgcgctgccgccggcgcacgacccgttcctgtcgctcgtgcccgacaccggcatcaag
ctgacgccgaagcattacgcgtacctcaagatttccgaaggctgcaaccaccggtgcagc
ttctgcatcatcccgtcgatgcgcggcgacctcgtgtcgcgccccgtcgacgacgtgttg
cgcgaagccgagaagctcgcgatgggcggcgtgcgcgaattgctggtgatctcgcaggac
acctcggcttacggcgtggacgtgaagtacgccgagcgcacctggcgcggcaagcagtac
cagacgcgcatgaagacgctgtgcgaaggcctgtcggaactcggcctgtggacgcgcctg
cactacgtgtacccgtacccgcacgtcgacgacatcatcccgctgatggccgacggcaag
ctgctgccgtacctcgacatcccgttccagcacgccagcccgcgcatcctcaagctgatg
aagcggccgggtgcggtggagaagacgctcgagcgcatccagcgctggcgcgcaacgtgc
ccggaactcgcgatccgttcgaccttcatcgtcggcttccccggcgagacggaagccgaa
ttcgaaacgctgctcgacttcctcgacgaagcgcagctcgaccgcgtcggcgcgttcgcg
tactcgccggtcgacggcgccaccgcgaatgcgttgcccgatccggtgccggaagccgtg
aagcaggagcgcctcgcgcgcttcatggaacggcaggcgatgatttccgccgatcgcctg
gaagcgaaggtcggcacggtgcagcagtgcctggtcgatgcgctggatggtgaactggcg
atcgcgcgttcgcgcttcgatgcgccggaaatcgatggcctggtgcagatccaggacggg
cgcgacgcgggcctgaagcccggcgatttcgtcgacgtcgaaatcctgggcagcgacgaa
cacgacctgttcggcgagacgtcctacgccgcgtaa
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