Lysobacter helvus: LYSHEL_24130
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Entry
LYSHEL_24130 CDS
T07483
Symbol
dniR_2
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
lhx
Lysobacter helvus
Brite
KEGG Orthology (KO) [BR:
lhx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lhx01011
]
LYSHEL_24130 (dniR_2)
Enzymes [BR:
lhx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LYSHEL_24130 (dniR_2)
Peptidoglycan biosynthesis and degradation proteins [BR:
lhx01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LYSHEL_24130 (dniR_2)
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Paralog
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GFIT
Motif
Pfam:
SLT
LysM
Motif
Other DBs
NCBI-ProteinID:
BCT96542
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Position
2523161..2524729
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AA seq
522 aa
AA seq
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MAASVTFRLPLVLAAGLAFTGLMPADAGAVSRRDQASIDALNQRMSAAEQKYRAAVVKIG
NADPTGQAQADSALEDMEDVVAACMQQKGCQVPTMLTTYKRLLKVNADAEAQVADGDDDM
DDGDGDDHINAMAADVPEAARAAQLLDDDHRFDQMVQYNPAVQAGIRRWLTDMRPALMDS
YENYEYMRHLMWPQYERAGLPEALLFGIMAKESNGKVHVSSRAGAAGPMQFMYNTGKRFG
LGPDGTGFDTRFDARSAAEASASYLNERMGELNRSIELALAAYNGGEGRALRVYQAGGGK
GFWDASVYNQFPPETRDYVPMVIAAAWLFLHPKQYGITFPKVDAKPAMLKLTRAASIYEL
TICLGNGGTREGYMRALRNLNPRYEADSRLPAGASLNATTKIVGLYNRHCTMGKRADLAH
QLVISDPTTAVVRVGDIAMVGGVTTPTAPVAVAADAKPAAKAAAAKPAKKKSYKVRSGET
LTAISRKFSCDTRALAEANKIKAPRYAIRPGQTLQLEGCTAD
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggccgcttccgtcacgttccgccttccgctcgtcctcgccgcaggcctcgcgttcacc
ggcttgatgcctgccgacgccggcgccgtgtcgcgccgcgaccaggccagcatcgacgcg
ctcaaccagcgcatgtcggccgccgagcagaagtaccgcgccgccgtggtgaagatcggc
aacgccgatcccaccggccaggcgcaggccgattcggcgctggaggacatggaagacgtg
gttgccgcctgcatgcagcagaagggctgccaggtgccgacgatgctcacgacgtacaag
cgcctgctgaaggtgaatgcggacgccgaagcccaggtggccgacggcgacgacgacatg
gacgacggcgacggcgacgaccacatcaacgcgatggccgccgacgtgccggaagccgcg
cgcgccgcgcagctgctggacgacgaccaccgcttcgaccagatggtgcagtacaacccg
gccgtgcaggccggcatccgccgctggctgaccgacatgcgcccggcgctgatggacagc
tacgagaactacgaatacatgcgtcacctgatgtggccgcagtacgagcgcgcgggcctg
cccgaagcgctgctgttcggcatcatggcgaaggaatccaacggcaaggtgcacgtgagt
tcgcgcgccggcgcggccggcccgatgcagttcatgtacaacaccggcaagcgcttcggc
ctgggcccggacggcacgggcttcgatacgcgcttcgacgcgcgttcggccgccgaagcc
agcgcctcgtacctcaacgagcgcatgggcgagctcaaccgcagcatcgaactcgcgctg
gccgcgtacaacggcggcgaaggccgcgcgttgcgcgtgtaccaggccggcggcggcaag
ggcttctgggatgcgtcggtgtacaaccagtttccaccggaaacgcgcgactacgtgccg
atggtgatcgcggcggcgtggctgttcctgcacccgaagcaatacggcatcaccttcccg
aaggtcgatgcgaaaccggcgatgctcaagctgacgcgtgcggcgtcgatctacgaactc
acgatctgcctcggcaacggcggcacgcgcgagggctacatgcgcgcgctgcgcaacctc
aacccgcgctacgaagccgacagcaggctgccggcgggcgcgtcgctcaatgcgacgacg
aagatcgtgggcctgtacaaccgccactgcacgatgggcaagcgcgcggacctggcgcac
cagctggtcatcagcgatccgacgacggcggtggtgcgcgtgggcgacatcgcgatggtg
ggcggggtgaccacgccgacggcgcccgttgcggtggcggcggatgcgaagccggcggcg
aaggctgccgcggccaagccggcgaagaagaagtcctacaaggtgcgcagcggcgagacg
ctgacggcgatctcgcgcaagttctcctgcgatacgcgtgcgctggcggaagccaacaag
atcaaggcgccgcgttacgccattcgtccggggcagacgttgcagctggaaggttgcact
gcggactga
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