Lysobacter helvus: LYSHEL_24850
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Entry
LYSHEL_24850 CDS
T07483
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lhx
Lysobacter helvus
Brite
KEGG Orthology (KO) [BR:
lhx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lhx03016
]
LYSHEL_24850 (truB)
Enzymes [BR:
lhx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LYSHEL_24850 (truB)
Transfer RNA biogenesis [BR:
lhx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LYSHEL_24850 (truB)
Prokaryotic type
LYSHEL_24850 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
BCT96614
UniProt:
A0ABN6G5P9
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All DBs
Position
2601054..2602061
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AA seq
335 aa
AA seq
DB search
MDPSPEPRVPSPGKRTRFRKLDGILLLDKPRGLSSNQALQRVRHLFRAEKGGHTGSLDPL
ATGLLPVCFGEATKIAGGLLGARKGYETVARLGIVTDTDDAEGAPLRERPVPALTIPVID
AALATLTGAQMQRPPIYSALKRGGEPMYARARRGEVLEVEPRPVDVHAFELISAADLLHG
DEPLLRLHVECGSGTYVRSLVRDLGELLGCGAHVAELRRLWVDPFRDPRMWTLEALQELA
DRGERMLDACLLPIETGMTAWPHLRVSAAQAMRLARGQSVAGASSTPGRVALYDDAGRAL
GLGQVDETGCLRPQRLFTWAAALGQPAPTVAKPLS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
ttggacccgagccccgagccccgagtcccgagccccggcaagcgcacgcgcttccgcaag
ctcgacggcatcctgctcctcgacaaaccccgcggcctgagttccaaccaggcgttgcag
cgcgtgcgccatctgttccgcgcggagaagggcggccacaccggcagcctcgatccgctc
gccaccggcctgctgccggtgtgcttcggcgaagcgacgaagatcgccggcggcctgctc
ggcgcgcgcaaggggtacgaaaccgtcgcgcgcctgggcatcgtcaccgacaccgatgac
gccgaaggcgcgccgctgcgcgaacggccggtgcccgccctcacgattcccgtcatcgac
gccgcgttggcgacgctcactggcgcgcagatgcagcggccgccgatctattccgcgctc
aagcgcggcggcgaacccatgtatgcccgcgcgcgccgcggcgaagtgctcgaagtcgag
ccacggccggtcgacgtccacgccttcgaactgatctccgccgccgacctgctgcacggc
gacgaaccgctgctgcgcctgcacgtggaatgcggctcgggcacctacgtgcgcagcctc
gtgcgggacctgggcgaactgctggggtgcggcgcgcacgtggccgagctgcgccgcctg
tgggtcgatcccttccgcgatccgcgcatgtggacgctggaagccctgcaggaactcgcc
gaccgcggcgaacgcatgctcgacgcctgcctgctcccgatcgaaaccggcatgaccgcg
tggccgcacctgcgcgtctcggccgcgcaggccatgcgcctggcgcgcggccagtcggtg
gccggcgcctcgtccacgcccggccgcgtcgcgctgtacgacgacgcgggccgcgcgctc
ggcctgggccaggtggatgaaaccggctgcctgcgcccgcaacgcctgttcacgtgggcg
gccgcactgggccagcccgctccgaccgtcgctaaacccttgtcctga
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