Lysobacter helvus: LYSHEL_27830
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Entry
LYSHEL_27830 CDS
T07483
Symbol
rluC
Name
(GenBank) pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
lhx
Lysobacter helvus
Brite
KEGG Orthology (KO) [BR:
lhx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lhx03009
]
LYSHEL_27830 (rluC)
Enzymes [BR:
lhx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
LYSHEL_27830 (rluC)
Ribosome biogenesis [BR:
lhx03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LYSHEL_27830 (rluC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TGS
Motif
Other DBs
NCBI-ProteinID:
BCT96912
UniProt:
A0ABN6G4R7
LinkDB
All DBs
Position
2868463..2869428
Genome browser
AA seq
321 aa
AA seq
DB search
MDPIDQPPGRAPAQARTVRIAEDRDGQRLDNFLLGYLKGAPRSLVYKLVRSGQVRVNGGR
VKADRRLEGGDEVRIPPVRLDEPAEKGTPAKGLLEAMEGSIVFEDARLLAINKPSGVASH
GGSGISFGAIETLRALRPNQSLELVHRLDRDTSGLLVIAKKRSALTELQALMREEGGIAK
RYLALLVGRLPNGTMSVDAPLHIGLRQGGERHVQVNPAGKASLSHFKALERRGGHSYCEV
RIETGRTHQIRVHAQHIGHPVAGDDKYGDEAVNKRLREQVGLKRMFLHASTLEFVLDGGK
APYLLNAPLAPELIDVLDKLA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggaccccatcgatcaaccccccgggcgagccccggcccaggccaggaccgtccggatt
gcagaggaccgggacggccagcggctggacaacttcctgctcggctatctcaagggcgcg
ccgcgttcgctggtctacaagctcgtgagatcgggccaggtgcgcgtgaacggcgggcgc
gtgaaggccgaccggcgcctcgaaggcggcgacgaggtccgcatcccgccggtgcgcctg
gacgaaccggccgagaagggcacgcccgccaagggcctgctcgaggcgatggagggcagc
atcgtgttcgaggacgcgcgcctgctggccatcaacaagccctcgggcgtggccagccat
ggcggcagcgggatcagcttcggcgcgatcgaaaccctgcgcgccctgcggcccaaccag
tcgctcgaactcgtccatcgcctcgaccgcgacacctccggcctgctggtcatcgcgaag
aagcgctcggccctcaccgaactgcaggcgctgatgcgcgaggaaggcggcatcgccaag
cgctacctcgcgttgctggtcggccgcttgcccaacggaacgatgagcgtcgatgcgccg
ctgcacatcggcctgcgccagggcggcgaacgccacgtgcaggtcaatcctgcgggcaag
gcctcgctgagccacttcaaggcgctggaacgccgcggcgggcattcgtactgcgaggtg
cgcatcgaaacagggcgcacgcaccagatccgcgtgcatgcgcagcacatcggccatccg
gtggcgggcgacgacaagtacggcgacgaagcggtgaacaagcgactgcgcgaacaggtg
gggctgaagcggatgttcctgcatgcctcgacgctggaattcgtgctcgacggcggcaag
gcgccttacctgctcaacgcgccgctggcgccggaactcatcgacgtgctcgacaagctg
gcctga
DBGET
integrated database retrieval system
