Lysobacter helvus: LYSHEL_28310
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Entry
LYSHEL_28310 CDS
T07483
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
lhx
Lysobacter helvus
Pathway
lhx03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lhx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LYSHEL_28310 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhx03019
]
LYSHEL_28310 (orn)
03009 Ribosome biogenesis [BR:
lhx03009
]
LYSHEL_28310 (orn)
Messenger RNA biogenesis [BR:
lhx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LYSHEL_28310 (orn)
Ribosome biogenesis [BR:
lhx03009
]
Eukaryotic type
Pre-60S particles
RNases
LYSHEL_28310 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
BCT96960
UniProt:
A0ABN6G6S4
LinkDB
All DBs
Position
2919071..2919640
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AA seq
189 aa
AA seq
DB search
MANSQSEGRLIWIDLEMTGLDTGRDSILEIATIVTDSNLEVLAEGPELAIVHPVAILESM
DEWNRNQHRKSGLWQRVVASRVTLDEAEARTLAFLSEWVPANASPMCGNSICQDRRFLHR
LMPSLERHFHYRNLDVSTLKELARRWAPGILGNLRKQAAHTALSDVRDSIAELAYYRKHM
GPLAGLPTN
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggcgaattcccagagcgaaggacggctcatctggatcgacctggagatgaccgggctg
gataccggtcgcgattcgatcctcgagatcgccaccatcgtcaccgactccaacctggag
gtcctggccgaaggcccggaactcgcgatcgtccaccccgtcgccatcctcgaatcgatg
gacgagtggaaccgcaaccagcaccgcaagtccggcctgtggcagcgcgtggtcgccagc
cgggtcacgctggacgaggccgaggcgcgcacgctggccttcctgtccgaatgggtgccc
gccaacgcctcgccgatgtgcggcaactcgatctgccaggaccgccgcttcctgcatcgc
ctgatgccgtcgctcgagaggcacttccactaccgcaacctcgacgtgagcacgctcaag
gaactcgcgcggcgctgggcgcccgggatcctcggcaacctgcgcaagcaggccgcccat
acggccctcagcgacgtgcgcgattccatcgcggagttggcctactatcggaagcacatg
gggccgctggcgggcctgccgaccaactag
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