Lysobacter helvus: LYSHEL_28740
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Entry
LYSHEL_28740 CDS
T07483
Symbol
rpfC
Name
(GenBank) sensory/regulatory protein RpfC
KO
K10715
two-component system, sensor histidine kinase RpfC [EC:
2.7.13.3
]
Organism
lhx
Lysobacter helvus
Pathway
lhx02020
Two-component system
lhx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lhx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LYSHEL_28740 (rpfC)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LYSHEL_28740 (rpfC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lhx01001
]
LYSHEL_28740 (rpfC)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
lhx02022
]
LYSHEL_28740 (rpfC)
Enzymes [BR:
lhx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
LYSHEL_28740 (rpfC)
Protein kinases [BR:
lhx01001
]
Histidine kinases
Other
LYSHEL_28740 (rpfC)
Two-component system [BR:
lhx02022
]
Other families
RpfC-RpfG (cell-to-cell signaling)
LYSHEL_28740 (rpfC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
HisKA
Hpt
DUF6338
APP1_cat
DUF8167
Motif
Other DBs
NCBI-ProteinID:
BCT97003
UniProt:
A0ABN6GAZ3
LinkDB
All DBs
Position
complement(2962551..2964734)
Genome browser
AA seq
727 aa
AA seq
DB search
MQALTALRQRLTNRPDSEHGQALVRLAVLSVVLAYLMVRGPDPTSPIAEYHDVLIMVATG
FAVGLGIVVSILVRPGVSHVRRAIGMVSDYGLMGLAMIRMGEPLAWVYVILMWVTVGNGL
RFGNRYLYLAVLGATTSFGATLVFNDYWHANRTLGLGLLLGLVAVPLYLSGLLRALTRAT
EEARRANEAKSTFLANMSHEFRTPLNGLAGMSELLATTRLDSEQRECLNTIQASTRSLLS
LVEDVLDISAIEAGKLKLHTVEFSLHELLGNIGAILQPTARNKRIDYILKVAPDVPERLV
GDAGHVRQVLINLAGNAIKFTDEGSVKLDVALAHAEDHKVRLRFTVIDTGIGIPAAARAR
LFEAFEQADASLSRRYGGTGLGTTIAKGLTEAMGGSIGFESSEMRGSRFWVELPFDLVPF
VAQPVGVPREAEAPSPAPVSYGNETGANVIAFGDPFLRHRARVRTLDLLIADDHAANRMV
LQRLLQKAGHRVVSVDDGEQVLDALAANSFDAAIVDLHMPGVSGLDLLRELRVMEAGGGK
RTPVIVLTADVTPEAIQQCAQAGARAFLPKPIVAARLLDTLAEVATSGQASSTTAANARV
ELPMGEDDFDPGVLEELGSLGMGESFVREFIQQCLRDAEACLASLEKSGEAGEWAQVRDH
AHALKGVSSNLGLVRLAAASSEWMRLPEWQLTREWRARFAVLRERMAQGRAALDARGHKA
ARDNENG
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgctgaccgccctccggcagcgattgaccaaccggcccgacagcgagcacgga
caggccctcgtacgcctggcggtgttgtcggtggtgctcgcgtacctgatggtgcgcggc
ccggatccgacgagcccgatcgccgaataccacgacgtgctgatcatggtcgccaccggg
ttcgcggtggggctgggcatcgtggtgtcgatcctcgtgcggccgggcgtgtcgcacgtg
cgccgcgcgatcggcatggtgtccgactacggcctgatgggcctggcgatgatccgcatg
ggcgaaccgctcgcgtgggtctacgtcatcctgatgtgggtcaccgtcggcaacggcctg
cgcttcggcaaccggtacctgtacctcgcggtgcttggcgccaccaccagcttcggcgcc
acgctggtcttcaacgattactggcacgccaaccgcacgctgggcctgggtttgctgctc
ggcctggtcgcagtgccgctgtacctgtcgggcctgctgcgcgcgttgacgcgcgccacc
gaggaagcgcgccgcgccaacgaagccaagagcacgttcctggcgaacatgagccacgag
ttccgcacgccgctcaacggcctggcgggcatgtcggaactgctcgccaccacgcgcctg
gacagcgaacagcgcgaatgcctcaacacgatccaggcctccacgcgctcgctgctgtcg
ctggtcgaggacgtgctggacatctcggcgatcgaggcgggcaagctcaagctgcacacg
gtcgagttctcgctgcacgaactgctcggcaacatcggcgcgatcctgcagcccaccgcg
cgcaacaagcgcatcgactacatcctcaaggtcgcgcccgacgtgcccgaacgcctggtc
ggcgacgccggccacgtgcgtcaggtgctgatcaacctggcgggcaacgcgatcaagttc
accgacgaaggctcggtgaagctcgacgtcgcgctcgcgcacgccgaagaccacaaggtg
cgcctgcgcttcaccgtgatcgataccggcatcggcatcccggccgcggcgcgcgcgcgg
ttgttcgaagccttcgagcaggccgacgccagcctgtcgcgccgttacggcggcacgggc
ctgggcaccacgatcgccaagggcctgaccgaagcgatgggcggcagcatcggcttcgag
agctcggaaatgcggggcagccgcttctgggtggaactgccgttcgacctcgtgccgttc
gtggcgcaaccggtcggcgtgccgcgcgaagccgaagcaccgtcgccggcgccggtgtcc
tacggcaacgagacgggcgccaacgtcatcgcgttcggcgatccgttcctgcgccaccgc
gcgcgcgtgcgcacgctggacttgctgatcgccgacgaccacgccgccaaccgcatggtg
ctgcagcgcctgctgcagaaggcggggcaccgcgtggtgagcgtggacgatggcgaacag
gtgctcgacgcgctggccgccaacagcttcgatgcggcgatcgtcgacctgcacatgccc
ggcgtcagcggcctggacctgctgcgcgaattgcgcgtcatggaagccggcggcggcaag
cgcacgccggtgatcgtgctcaccgccgacgtcacgcccgaagcgatccagcaatgcgcg
caggccggtgcccgcgcgttcctgcccaagcccatcgtggcggcgcgcctgctcgatacc
ctggccgaggtggccacgagcgggcaggcctcgtccaccacggccgcgaacgcacgcgtg
gaattgccgatgggcgaggacgacttcgatccgggcgtgctcgaggaactcggatcgctc
ggcatgggtgaatcgttcgtgcgcgaattcatccagcaatgcctgcgggacgccgaggcg
tgcctggcgtcgctggagaaatccggcgaagccggcgaatgggcgcaggtccgcgaccac
gcgcacgcgctgaagggcgtgtcgagcaacctgggcctggtgcggctggccgcggccagc
agcgaatggatgcggctgccggaatggcagctcacgcgggaatggcgcgcgcggttcgcg
gtgttgcgcgaacgcatggcgcaggggcgcgcagcgctggacgcgcgcggacacaaagcc
gcgcgcgacaacgaaaacggctga
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