Lysobacter helvus: LYSHEL_29880
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Entry
LYSHEL_29880 CDS
T07483
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
lhx
Lysobacter helvus
Pathway
lhx03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
lhx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LYSHEL_29880 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhx03032
]
LYSHEL_29880 (dnaB)
Enzymes [BR:
lhx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
LYSHEL_29880 (dnaB)
DNA replication proteins [BR:
lhx03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LYSHEL_29880 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
AAA_22
nSTAND3
CbiA
NPHP3_N
DUF6200
ATPase
AAA
Motif
Other DBs
NCBI-ProteinID:
BCT97117
LinkDB
All DBs
Position
complement(3086642..3088054)
Genome browser
AA seq
470 aa
AA seq
DB search
MSVRQGLRSDAAFSTRNDDRVERLRIPPQSVEAEQAVLGGLMLSPEAYDRVADALVETDF
YRRDHQLIFRAIRELAERNKPYDAVTLGEWFESMGLSEQVAGGAYLIELASTTPSAANIK
AYADIVRDKAVLRQLIDVGTGIVNDGFLPDGRDSTEILAKAEQDVFAIAEAGARGRTDFT
PVTKALSEAFDVLQKRYESGGSVTGLPTGYTEFDEMTAGLQPTDLLILAARPAMGKTTLA
LNMAEYAAMKTKKAVAVFSMEMSASQLALRLISSTGRVNATRLRTGQLEDEDWSRVTSAI
RLLRDAKIFIDDTPALSPDMLRAKSRRLKREHDLGLIVIDYLQLMAVPGNSENRATEISE
ISRSLKGLAKELNVPVIALSQLNRSLETRTDKRPVMADLRESGAIEQDADVIVFIYRDEY
YNKENSPDKGLAEVIIGKQRNGPTGSIKLKFFGEYTRFDNLAHDSVGSFE
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcgccagggtttgcgttccgatgccgcgttctccacgcggaacgatgaccgc
gtcgagcggttgcgcattcccccgcagtcggtggaggccgagcaggccgtcctcggcggg
ctcatgctttccccggaagcctacgaccgcgtcgccgacgccctggtcgaaaccgacttc
taccgccgcgaccaccagctgatcttccgcgcgatccgcgagctggccgaacgcaacaag
ccctacgacgcggtgacgctgggcgaatggttcgagtcgatgggcctgtcggagcaggtg
gccggcggcgcgtacctgatcgaactcgccagcaccacgccgtcggcggccaacatcaag
gcctacgccgacatcgtgcgcgacaaggccgtgctgcggcagctgatcgacgtcggcacc
ggcatcgtcaacgatggcttcctgcccgacggccgcgacagcaccgagatcctcgccaag
gccgagcaggacgtgttcgcgatcgccgaagccggcgcgcgcggccgcaccgacttcacc
ccggtgaccaaggcgctgtcggaagccttcgacgtgctgcagaagcgctacgagagcggc
ggcagcgtcaccggcctgccgacgggctacaccgaattcgacgaaatgacggcgggcctg
cagcccaccgacctgctgatcctcgccgcgcgccccgcgatgggcaagaccacgctcgcg
ctgaacatggccgagtacgcggcgatgaagaccaagaaggccgtcgcggtcttctcgatg
gaaatgtcggcctcgcagcttgcactgcgcctgatttcctccaccggccgcgtcaacgcc
acgcgcctgcgcaccggccagctcgaggacgaggactggagccgcgtgaccagtgcgatc
cgcctgctgcgcgacgcgaagatcttcatcgacgacacgccggcgctgtcgcccgacatg
ctgcgcgccaagtcgcgtcgcctcaagcgcgagcacgacctgggcctgatcgtcatcgac
tacctgcagctgatggcggtgccgggcaacagcgagaaccgcgcgaccgagatctccgag
atctcgcgctcgctcaagggcctggcgaaggaactcaacgtgccggtgatcgcgctctcg
cagctcaaccgctcgctggaaacgcgcaccgacaagcgccccgtgatggccgacctgcgc
gaatccggcgccatcgagcaggacgcggacgtgatcgtcttcatctaccgcgacgagtac
tacaacaaggaaaactcgccggacaagggcctggccgaagtgatcatcggcaagcagcgt
aacggcccgaccggttcgatcaagctgaagttcttcggcgaatacacgcggttcgacaac
ctggcccacgattcggtgggcagcttcgagtag
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