Lysobacter helvus: LYSHEL_31140
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Entry
LYSHEL_31140 CDS
T07483
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
lhx
Lysobacter helvus
Brite
KEGG Orthology (KO) [BR:
lhx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lhx03016
]
LYSHEL_31140
Enzymes [BR:
lhx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
LYSHEL_31140
Transfer RNA biogenesis [BR:
lhx03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
LYSHEL_31140
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
BCT97243
UniProt:
A0ABN6GBL5
LinkDB
All DBs
Position
complement(3219643..3220158)
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AA seq
171 aa
AA seq
DB search
MRHLFFALAPDAALRDAIANDAARLHLAWGGRATKPAKLHMTLRFLQGFTDPLPDDVVAA
ARAAGDAIASVPFAFELDRADRFGRRIGWLGCAVTPRPLQALHDALTESCRAHAVPMREE
ERFVPHVTILRDPKRAVPSAIAPLRWQVDGFVLMASAEGAYEVLGRWALRA
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgcgccacctgttcttcgccctcgcaccggatgcggcgctgcgcgacgcgatcgccaac
gacgccgcgcgcctccacctggcgtggggcggccgcgcgacgaagcccgcgaaactgcac
atgacgttgcgcttcctgcagggcttcacggatccgctgccggacgatgtcgtcgcggcg
gcgcgcgcggcgggcgatgcgatcgcaagcgtgccgtttgcattcgaactcgatcgcgcg
gaccgcttcggccgtcgcatcggctggctcggctgtgcggtgacgccgcggcccttgcag
gcgttgcacgacgcgctcacggaatcgtgccgcgcgcatgccgtgccgatgcgcgaggag
gagcgcttcgtgccgcacgtgacgatcctgcgcgatccgaaacgcgcggtgccgtcggcc
attgcgccgttgcgctggcaggtggacggattcgtgctgatggcgagtgcggaaggggcg
tacgaggtgttggggcgctgggcgttgcgggcgtga
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