Listeria ivanovii subsp. londoniensis WSLC 30167: JL58_04510
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Entry
JL58_04510 CDS
T03401
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lia
Listeria ivanovii subsp. londoniensis WSLC 30167
Pathway
lia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JL58_04510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lia03019
]
JL58_04510
03009 Ribosome biogenesis [BR:
lia03009
]
JL58_04510
Enzymes [BR:
lia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JL58_04510
Messenger RNA biogenesis [BR:
lia03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JL58_04510
Ribosome biogenesis [BR:
lia03009
]
Prokaryotic type
rRNA helicases
JL58_04510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
NABP
Motif
Other DBs
NCBI-ProteinID:
AIS59288
LinkDB
All DBs
Position
973256..974836
Genome browser
AA seq
526 aa
AA seq
DB search
MTLTKFSEFGLDEKIVKSVNRMGFEEATPIQEKTIPLGLAGKDLIGQAQTGTGKTAAFGL
PMIHKIDQKSNNVQALIIAPTRELAIQVSEELYKLSYDKHVRVLAVYGGSDISRQIRSLK
KNPQIVVGTPGRILDHINRRTLKLDNVETLVLDEADEMLNMGFIDDIETILKEVPAERQT
LLFSATMPDPIRRIGERFMHSPELIRIKAKEMTALLIEQFFVKVHEKEKFDVLSRLLDVQ
APELAIVFGRTKRRVDELSRALDMRGYVAEGIHGDLTQAKRMSVLRKFKEGKIDVLVATD
VAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKEGMAITFVQPREMGYLRIVEET
TKKRMQPLQAPTWDEAFAGQLRVATEKIQEAITEENLADYKTFANELLEKYDATDIAAAM
LKMLAKEPDKTPVHITEERPLPSRGGGGYKGKGGNGKGGKGGGGYRGGSGKGGSYRDRNN
SGKGRRSGGGSGGGNGSGGGNRDRRGNGEQRPSGGGNKGSYSQKSK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgacattgacaaaattttcggagttcggactggacgaaaaaattgtaaaatcagtaaat
cggatggggtttgaagaagcaacgccaatccaagaaaaaacaattccactaggattagca
ggtaaagacttaatcggacaagcacaaacaggtactggtaaaacagccgcttttggtcta
ccaatgattcacaaaattgaccaaaaaagtaataacgtacaagctttaattatcgctcca
acacgggaacttgcaatccaagtttcagaagagctttataaactcagctatgacaaacat
gtacgtgtgctagcggtttatggtggtagtgatatcagccgtcaaatccgttcacttaag
aaaaacccacaaatcgtagttggtacgccaggacgtattttggatcatattaaccgtcgc
acactgaaactagacaacgtggaaacacttgtactagatgaagcagacgaaatgctaaac
atgggcttcattgacgatatcgaaactattcttaaagaagtaccagcagaacgtcaaact
ttactattttctgcaacaatgcctgatccaattcgccgtattggtgaacgtttcatgcat
agcccagaacttattcgtattaaagcgaaagaaatgactgcactattaatcgaacaattc
ttcgtaaaagtgcacgaaaaagaaaaatttgacgtattatcgcgtttgctagacgtacaa
gcaccagaacttgctattgtttttggtcgtacaaaacgtcgtgtagatgaattatctcgt
gcgcttgatatgcgtggttacgtggctgaaggtatccacggtgacttaacgcaagcaaaa
cgtatgagcgtactgcgcaaatttaaagaggggaaaattgatgttctagttgcaacagac
gtagcagcacgtggacttgatatttccggcgtaactcacgtatataactatgacattcct
caagatccagaaagctatgttcaccgtattggtcgtactggtcgtgctggtaaagaaggt
atggcaattacattcgtacaacctcgtgaaatgggttacctgcgtatcgtagaagaaact
acgaaaaaacgtatgcagccacttcaagctcctacttgggacgaagcttttgcaggccaa
ttacgtgtagcaacagaaaaaattcaagaagcaattacagaagaaaatcttgccgattac
aaaacttttgctaatgaattattagaaaaatatgatgcaacagacatcgcagctgcaatg
cttaaaatgctagctaaagaaccagacaaaacaccagttcatattaccgaagagcgtcca
ttaccatctcgtggtggtggcggctacaaaggtaaaggtggaaatggtaaaggcggcaaa
ggtggcggcggctatcgcggcggaagcggtaaaggcggaagctatcgcgatcgtaacaac
agtggaaaaggtcgtcgtagcggcggcggttccggtggtggaaacggttctggcggcgga
aatcgtgatcgtcgtggaaacggcgaacaacgtccaagtggtggcggaaacaaaggaagc
tactcacaaaaatctaaataa
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