Listeria ivanovii subsp. londoniensis WSLC 30167: JL58_06650
Help
Entry
JL58_06650 CDS
T03401
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lia
Listeria ivanovii subsp. londoniensis WSLC 30167
Brite
KEGG Orthology (KO) [BR:
lia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lia03032
]
JL58_06650
03400 DNA repair and recombination proteins [BR:
lia03400
]
JL58_06650
Enzymes [BR:
lia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JL58_06650
DNA replication proteins [BR:
lia03032
]
Prokaryotic type
DNA Topoisomerases
JL58_06650
DNA repair and recombination proteins [BR:
lia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JL58_06650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Lar_restr_allev
JHBP
DUF2996
Toprim_2
Toprim_3
HypA
Motif
Other DBs
NCBI-ProteinID:
AIS59672
LinkDB
All DBs
Position
1375423..1377501
Genome browser
AA seq
692 aa
AA seq
DB search
MADYLVIVESPAKAKTIEKYLGKKFKVKASMGHVRDLPKSQMGVDTEHDYEPRYITIRGK
GPVLKELKQAAKKAKKVYLAADPDREGEAIAWHLANSLDLDQSDKLRVVFNEITKEAVKE
SFKTPRKIDMDLVNAQQARRILDRLVGYNISPILWKKVKKGLSAGRVQSIALRIIIDREK
EINNFKPEEYWTIDGNFLKGKKKFQANFYGVNGKKKKLSTADDVKEVMSAIRGKSFDVTD
VTKKERLRNPAAPFTTSSLQQEAARKLNYRTRKTMMLAQQLYEGITLGKQGTVGLITYMR
TDSTRIADSAILEAGNYIKETYGPEFSRNHKRSDKNAKGAQDAHEAIRPTSAMRSPQAVK
EYLTRDQLRLYRLIWERFIASQMTPAVLDTMRVDLDNNGVNFRANGSKIKFHGFMKVYVE
SNDDNTEEKENILPDLKKGDKVQSESLEQRQHFTQPPPRYTEARLVKTLEEIGIGRPSTY
SPTLDTIQRRNYVSLTNKRFIPTELGEIVNEMIEEYFPEILDVKFTANMESELDEVEHGQ
VEWVKVIDEFYKQFEPNVIKADAEMEKIEIKDEPAGIDCDLCGAPMVYKMGKYGKFLACS
RFPDCRNTKAIVKEIGVTCPKCEKGHVIERKSKKKRIFYGCDRYPDCDYVSWDKPVERAC
PKCNERALVEKKLKKGVQVQCTNCDYKESTQQ
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatttagtgattgtagagtcacctgcaaaagcaaaaacaattgaaaagtat
ttaggaaagaaatttaaagtgaaagcgtccatgggtcatgttagagacttaccgaaaagt
cagatgggtgttgatacagaacatgactatgaaccaaggtatatcactattcgtggtaaa
ggtcctgttttaaaagaattaaagcaagccgctaaaaaagcaaaaaaagtctatctcgcg
gccgatccagatcgcgaaggagaagcaattgcatggcatttggcgaacagtctagactta
gatcaatcagacaaattgcgagtggtatttaacgaaattacgaaagaggcagtaaaagaa
tcatttaaaactcctcgaaaaatagatatggacttagtaaatgcacagcaagctaggaga
atattggatcgtttagttggttacaatatcagcccgattttatggaaaaaagtaaaaaaa
ggcttgagtgcaggccgtgttcaatcaattgcacttcgaattatcattgacagagaaaaa
gaaatcaataatttcaaaccggaagaatattggacaattgatggtaatttccttaaaggt
aagaaaaaattccaagctaatttttatggcgtaaatggtaagaagaaaaagctttcaacc
gctgatgatgtaaaagaagttatgtccgcaattagagggaaatcattcgatgttacggat
gtaaccaaaaaagaacgacttagaaatccagctgcaccatttactacatctagtctacaa
caagaagcagcaaggaaattaaattatcgtacacgtaaaacaatgatgcttgctcaacaa
ttatatgaaggtattacgcttggaaaacaaggtactgttggattgataacctatatgcgt
actgactctactcgtattgcggattcagctattttagaagcaggtaattatattaaagaa
acatacggacctgaattttctcggaatcacaaacgttctgataaaaatgcaaaaggtgct
caagatgcccatgaagcaattcgtccaacaagtgcaatgagaagcccgcaagcagtgaaa
gaatatctgacgcgtgatcagcttcgcttgtaccgcttgatttgggaacgatttattgcc
agccaaatgacaccagctgttctggatacaatgcgtgttgatttagataataatggtgtg
aattttagagctaatggatcaaaaatcaagtttcatggctttatgaaagtttatgtagaa
agcaatgatgataatacggaagaaaaagagaatattttacctgatttgaaaaaaggcgat
aaggtacagtcggaatcacttgaacagcgccagcattttactcagccgcctccccgttat
acagaggcaagattagttaaaacactggaagaaataggaattggacgaccatctacctat
tcacctacattagatacaattcagcggagaaattatgtatccttgaccaataaacgtttc
attccaactgaattaggtgaaatcgtcaatgaaatgattgaagaatacttcccagaaatt
ttagatgtgaaattcacagctaatatggaaagcgagttagatgaagtagagcatggacaa
gtagaatgggtcaaagtaattgatgagttttataaacaattcgagccaaatgtgattaaa
gctgatgccgaaatggaaaaaattgaaattaaagatgaacctgctggtatcgactgtgat
ctttgcggagcgccaatggtatataaaatgggtaaatatggaaaattccttgcttgtagc
agattccctgattgccgaaataccaaagcgattgtaaaagaaattggtgttacttgtcct
aaatgcgagaaagggcatgttatcgaaagaaagagcaagaaaaaacgaattttttatggt
tgcgatcgctatccagattgtgattatgtttcatgggataaaccagtagaacgagcttgt
ccaaaatgtaatgaacgagcacttgtagaaaagaaactgaaaaaaggtgtacaagttcaa
tgtaccaactgcgattataaagaatcaacacaacaataa
DBGET
integrated database retrieval system
