Listeria ivanovii subsp. londoniensis WSLC 30167: JL58_07260
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Entry
JL58_07260 CDS
T03401
Name
(GenBank) ribonuclease
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
lia
Listeria ivanovii subsp. londoniensis WSLC 30167
Pathway
lia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JL58_07260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lia03019
]
JL58_07260
Messenger RNA biogenesis [BR:
lia03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JL58_07260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
HTH_6
FUT8_N_cat
Motif
Other DBs
NCBI-ProteinID:
AIS59790
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Position
1501926..1503488
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AA seq
520 aa
AA seq
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MTIAITIISSLLFLIVGLVVGSLIFKSSTEKKLAAARGTAELIVEDAKKEAETTKKEALL
EAKEENHRLRTEIENELRGRRTETQKAENRLLQREENLDRKDTSLSKREATLERKEESIS
KRQQQIEEKESKLAEMIQAEQTELERISALSKEEAKSIILNQVEDELTHDTAIMVKESEN
RAKEESDKKAKNILSLAIQRCAADHVAETTVSVVTLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRREIARIALEKLVQDGRIHPARIEEMVDKARKEVDEHIR
EVGEQATFEVGIHSIHPDLIKILGRLRYRTSYGQNVLNHSLEVSKLAGILAGELGEDVTL
AKRAGLLHDIGKAIDHEIEGSHVEIGVELATKYKENDVVINSIASHHGDTEATSVIAVLV
AAADALSAARPGARSETLENYIRRLEKLEEISESYDGVEKSYAIQAGREVRIIVEPDAID
DLASYRLARDIRKRIEEELDYPGHIKVTVIRETRAVEYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcgcaatcacgatcatctccagtttgcttttcttaatcgtcggtctagttgtt
ggttctctaatttttaaatctagtacagagaaaaaactggctgctgcaagggggactgcg
gaattaattgtagaagatgcaaagaaagaagcagaaactacaaaaaaagaagcattgctt
gaagcgaaggaagagaatcataggttacgtactgaaatcgaaaatgaacttcgtgggcga
agaacagagacacaaaaagcagaaaatcgcttattgcaaagggaggaaaacctcgaccgt
aaagatacttctttaagtaaacgagaagctacacttgaaagaaaagaggagagtatcagt
aaacgtcaacaacaaattgaagagaaagaaagcaaactagctgagatgattcaagcggag
cagacagaacttgaaagaatttctgcactgagcaaagaagaagcgaaatcaatcatcctt
aaccaggtagaagatgaattaacacatgatacagcaatcatggtgaaagaatcggaaaac
cgggcgaaggaagagtcggataaaaaagcaaagaatattctctcactagctatccagcgt
tgtgcagctgatcatgtggcagaaacaacggtatctgttgttaccttaccaaatgatgag
atgaaaggacggattatcggacgtgaaggccgtaatatccgcacgctagaaacgctaaca
ggaatcgatttgataattgatgatacaccggaagcagtaatactttccggatttgatcca
attcgacgagaaatcgctagaatcgccttagaaaaacttgttcaagatggaagaatccat
ccagctcgcattgaagaaatggtggataaagcccgtaaagaggtggacgaacacattcgc
gaagttggtgaacaagcaacatttgaagtgggaattcattccattcatcctgatttaata
aaaattcttggccgcttgcgttaccgtactagttacggacaaaacgttcttaaccactcg
ctcgaagtttcgaaacttgctggaattttagcaggggagctcggggaagatgtgacgctt
gctaaacgggccggactacttcatgatattggtaaagcaattgaccatgaaattgaagga
agtcatgtagaaattggcgtggaacttgcaactaaatacaaagaaaatgatgtagtaatc
aacagtattgcttctcatcatggagatacagaggctacttctgttatcgctgtattggtg
gctgcagcagatgcgctttctgccgcaagaccaggagctcgtagtgaaacgctagaaaac
tatattcgtcgtttagagaaactagaagaaatttctgagtcttacgatggtgtagaaaaa
tcttatgctattcaagcaggacgtgaagtacgtatcattgttgagccagatgctatcgat
gatcttgcttcttaccgacttgctcgcgacataagaaaacgaattgaagaggaattagat
tatccgggccatattaaagtgaccgtcattcgtgaaacaagagcagtagaatatgctaaa
taa
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