Listeria ivanovii subsp. londoniensis WSLC 30167: JL58_08245
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Entry
JL58_08245 CDS
T03401
Symbol
dnaE
Name
(GenBank) DNA polymerase III DnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lia
Listeria ivanovii subsp. londoniensis WSLC 30167
Pathway
lia03030
DNA replication
lia03430
Mismatch repair
lia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JL58_08245 (dnaE)
03430 Mismatch repair
JL58_08245 (dnaE)
03440 Homologous recombination
JL58_08245 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lia03032
]
JL58_08245 (dnaE)
03400 DNA repair and recombination proteins [BR:
lia03400
]
JL58_08245 (dnaE)
Enzymes [BR:
lia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JL58_08245 (dnaE)
DNA replication proteins [BR:
lia03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JL58_08245 (dnaE)
DNA repair and recombination proteins [BR:
lia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JL58_08245 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
POT1
DUF655
Complex1_51K
Motif
Other DBs
NCBI-ProteinID:
AIS59980
LinkDB
All DBs
Position
complement(1718219..1721545)
Genome browser
AA seq
1108 aa
AA seq
DB search
MGFVHLQVASAYDLLSSTASIDSLVAKAKEYHYPALAITDKNVLYGAVEFYQKCLAADIK
PIIGMTVTIQGYLNPINSYELILIAETTAGYHELLKIASAIQTREEGQELPQSWLRAYSS
NLIAISPGAKGEVERLLMEENQDGALEAYQNLVTIFGENSVYLSLQKENPRLFAKIQTFC
AEENIRAVATKDVQYIEPKDAQAKEVLTAIRDNRTVDWTTLPLAGPNYFTSQEEMEREWQ
NDFEKTACEETGKLADRCQVKIALDQHLLPRFPLEAKQKASEVLRQTAYAGLEERGLMAP
EYQERLDYELKVITEMGFADYFLIVWDVIRYSREVGILTGPGRGSAAGSLVSFVLRITDV
DPIKYNLLFERFLNPERITMPDIDLDFPDNRRDEVISYVVSKYGEAHVAQIGTFGTLAAK
AAIRDTARSFGLNSVLLSEWSKLIPSQLGITLHKAIQENPRLENHIKSSKVNEMIWEVAC
QLEGLPRHISTHAAGIVISDKPLVEQVALQLGSGDARLTQFAMGELEKIGLLKMDFLGLR
NLSLLDRVLKSVNYTREKPLTLADISLEDEKTLKLFQTGDTTGVFQFESDGIRRVLRKLK
PTSFEDIVAVDALYRPGPMEQIDTFIARKHGKEAIQYPHPDLAPILEVTYGVIVYQEQII
QVANQMAGFSLGEADLLRRAVSKKKADVLQEERIHFVEGARSKGYSESSANQVYDMIVQF
ANYGFNRSHAAAYSKIAFQLAYLKANYPAAFMSSLLSSVFGNDDKIAQYITEAKNYGIHM
LAPSINHSNYYFQMESETSIRYSFRVIRKVPTKFVLEIINERKKAPFQDFFDFCERMPHK
MLSETVLEALVLSGCFDEFGEDRATILATIDAVLQYISLLGEDSKGMNLFAEDDDFLKKM
KPRYRKTAPISIDEKLEKEKLYTGQYVSAHPVSYYQTKLQNLTITRLANISSGKMYQVAV
YIHEVKSIRTKKGETMCFMTISDDTKELSAVMFPESYRKYASLAQKGEILFLHVKADKRN
GELQLIVNQAEDLKKVKAPARLFIKLTEPTQMEQIRPILVQFKGKSKVIIHHALTKQTTE
LKNIQVSPSNELQEALVELLGKENVVFK
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
gtgggatttgttcacttacaagttgcgagcgcatatgatttactttcaagtactgcatca
attgattcgcttgtcgctaaagcaaaagaataccattatccagccttggcaattacggat
aaaaatgtgctttacggtgcagttgagttttaccaaaaatgtttagcggcagatataaaa
ccaattattgggatgacagtaacaatacaaggttatttaaatccaattaattcctatgag
ttgatattaattgctgaaacgactgctggatatcacgagttacttaaaatcgctagtgcc
attcaaacgcgtgaagaaggacaagaacttccgcaaagttggctacgagcttatagtagt
aatctcatcgcgatttcgccaggtgccaaaggggaagtggagcggctacttatggaagaa
aatcaggacggggcgttagaagcctaccaaaatttagtcactatttttggagagaattct
gtttatttgtcgttacaaaaagaaaaccctcgccttttcgcaaaaatccaaacgttttgt
gcggaagaaaacattcgtgcagtagcaacgaaggatgtacaatatattgaaccaaaagat
gcgcaggcaaaagaagttttgacggccattcgagataatcgtacggttgattggacaacg
ctaccacttgcaggtccgaattactttacttcgcaggaagaaatggagcgagagtggcaa
aacgattttgaaaaaacagcttgtgaggaaactggcaaattagcagatcgttgccaagtg
aaaatcgctcttgatcaacatttattaccacgtttccctttggaagctaagcaaaaggcg
tcggaggttttacgacaaacggcctatgctggattagaagagcgaggattaatggcacca
gaatatcaagaacgtttggattatgagttaaaagtaatcacagaaatgggatttgcagat
tattttcttatcgtttgggatgttattcgttattctagagaggtcggaattttaacaggc
cctggtcgtggctcggcagcgggatcgttagtttcttttgtgttaagaattaccgatgtt
gatccgattaaatataacttgctatttgagcgttttttaaatccagagcgaatcaccatg
ccagatattgacttggattttccagataatcgtcgtgatgaagtaatttcttatgttgta
tcaaaatacggggaagcacatgtggcacaaattggtacatttggtacgcttgcagcaaaa
gcagcgattcgtgatacggcaaggagttttggtctgaattccgtgcttttatctgaatgg
tctaaacttatcccaagccaattagggattactttacacaaagcgattcaagaaaatccg
cggctagaaaaccatataaaaagttcgaaagtaaatgaaatgatatgggaagtagcctgt
cagctagaagggttaccgcgccatatttccacccatgcagccggaattgtcattagtgat
aaaccgcttgttgaacaagtcgctctgcaattaggtagtggcgatgcacgcttaactcag
tttgccatgggagaattagaaaaaatcggcttacttaaaatggactttcttggacttaga
aatttaagtttacttgatcgtgtgttaaagtcggtcaactatacccgagaaaagccgtta
actttggcagatatttcactagaagatgaaaaaacgttaaaattattccaaactggggat
accacaggtgtttttcagtttgaatctgatggaattcgtcgtgtacttcgaaagttaaaa
ccaacctcttttgaagatattgttgcagtagatgcgctttatcgtccaggcccaatggag
caaattgatacatttattgctagaaagcatgggaaagaagcgatacaatacccgcatcct
gatttggcgccgattttagaagtgacatatggcgttatcgtttatcaagaacaaattatt
caagttgctaaccaaatggctggattttcacttggcgaggcagatttattacgtcgtgca
gtaagtaagaaaaaagcagatgtgctacaggaagaacgtattcattttgtggaaggggcg
agaagtaaaggttattctgaaagtagcgccaatcaagtctatgatatgattgtgcaattt
gcaaattatggatttaaccggagtcatgccgccgcatattccaaaattgcctttcaatta
gcttaccttaaagcaaactacccagcagcgtttatgtcttccttactaagttctgttttc
ggaaatgacgataagattgcccaatatattaccgaagcaaaaaattatggtattcatatg
ttagcgccaagtattaatcatagtaattattatttccaaatggaaagcgaaacatctatc
cgctatagttttcgtgttattcggaaagtaccaaccaaattcgttctcgaaattatcaac
gaacgaaaaaaagcgccttttcaagacttctttgatttttgtgaaagaatgccacataaa
atgctgtcagaaacggtattagaagcgttagttttatccggatgttttgatgagttcgga
gaagaccgagcaactattttagcaacgattgatgcagtactgcaatacatttctcttctg
ggtgaagattctaaagggatgaatctttttgcagaagacgatgatttcttgaagaaaatg
aaaccacgttaccggaaaactgcgcccatttcgatagatgaaaaattagaaaaggaaaaa
ctatatacaggtcaatacgtgtctgcgcatccggtatcatactatcaaacaaaattacaa
aatttgactattactagacttgcgaatattagttccggaaaaatgtatcaagtagctgtt
tatatccatgaagtaaaatctattaggaccaaaaaaggcgaaacaatgtgttttatgact
atcagtgatgatacgaaagaattaagcgctgtgatgtttccagaaagctatcgcaagtac
gcttcgcttgctcaaaaaggagaaattcttttcctgcatgtcaaagcagacaaaagaaac
ggagaacttcaactaattgtcaaccaagcagaagatttaaaaaaagtgaaagctcctgca
aggctatttatcaaattaacagaaccaacgcaaatggaacaaataagacctattttggta
caatttaaagggaagtcaaaggtcattatccatcatgccctgactaagcaaacaaccgaa
ttaaaaaatattcaagtttcgccttcaaatgaattacaagaggcgctagtagagcttctt
gggaaagagaatgttgtgtttaagtaa
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