Listeria ivanovii subsp. londoniensis WSLC 30167: JL58_08625
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Entry
JL58_08625 CDS
T03401
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lia
Listeria ivanovii subsp. londoniensis WSLC 30167
Brite
KEGG Orthology (KO) [BR:
lia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lia03400
]
JL58_08625
DNA repair and recombination proteins [BR:
lia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JL58_08625
Archaeal homologous recombinant proteins
JL58_08625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
ABC_tran
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AIS60053
UniProt:
A0A097BDX1
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Position
complement(1803788..1806859)
Genome browser
AA seq
1023 aa
AA seq
DB search
MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD
RESFSMRSHFATDKELTEVKLIFRLKEHIYQISRIPQQEIAKQRGNGTTTSPQKAELYEL
IGDEMKLLASSVRDVNTKMEELIQLNVDQFRQILMIPQGEFRELLVSDSKEKEVILQRLA
HTLYYEKVENILWEKQKEAEVLVTEARKKVVELAELSTPGVEVAGKTTVEISTLQTKLIA
QEEGHLFDLERELLVIREETSKAVEKVTLAKEQLLDWHNLDLYTEEVASLEQAMDYYKTM
EERVEKAKRASNLRSQDALCIRLKEQLQTAEMTEKQVTTDAEKVAEQFANAKKQKEILAE
QEAEYEKNKRHLFQLEEMEPKIIELETITVQKRRAELAWKEQADILQKVITNQQALLEEL
HLAETQLTEITKAELANLEAINQRTTSESLMEKKQELLNKRTKMIAWEKEKQSAEQTLTQ
LFSEKVTMEAMIKQEEAKFEKEQAAILAEHLHDGEACPVCGSHTHPELATWGEAANVEKL
EAAKADLQAKQLTISATEKSISQLEWQLNEWADIQDLSLAEVEKHLAEQQQSANELTKQI
EELQLKVAQKETIQTKITTLKNKQTEAESELNNIGQQVESLHQQVQLTTGKLSYLEQSIP
SSMRDKASFDQQKNTLQANIQNHKEKKERVDTAYQQAEKETTRLESTLTVAIKTTADAKS
ALQMQREIFKVAMKENHFSNYEDYKYALLSNEELTSLEAQISEYQKKRHLAISRQADLTA
KLKDKQKPNIEQLEIFMKEKQQILTEVEEKTMRQRQLVTKRKELIENYQKSIQTVEQAEI
SYADIGLLSDVARGKNPRRLTFERYILALFLDTIIHRANHRLSKMTSGRFELRRKIEKAK
GNVQSGLELEVFDEYTGLTRHVKTLSGGESFKTSLALALSLAEVVQEMAGGISLETMFID
EGFGTLDPESLEVAVECLLETQENGRLVGIISHVPELKERISARLEVTATNHGSTTKFMT
SNS
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgagaccaatcaaactaacaatgcaagcttttggtgcttatgctaaaaaagaagtgatt
gattttgaaaaactgggaaccgagcaaatctttgtcatttctggaaaaacgggtgctggg
aaatcaactatttttgatgcaattagttttgcgatatttggaaaagcaaatacatttgat
agagagagtttttcgatgcgtagtcattttgcgacggataaagaacttacagaagtgaaa
ctcatttttagactgaaagagcatatttatcagattagccgtattcctcagcaagaaatt
gccaaacaacgcggaaacgggacgacaacttctcctcaaaaagccgaattatatgaactg
attggcgacgaaatgaagctgctcgcaagctcagttcgagatgttaatacgaaaatggaa
gagctaattcaattaaatgtcgatcaatttagacagattttgatgattccccaaggtgag
tttcgtgaactacttgtttctgatagtaaagaaaaagaagtaatactgcaacgacttgcg
catacgctttattatgaaaaagtagaaaatattttatgggaaaagcaaaaagaagccgaa
gttttagtaacagaagctaggaaaaaagtggtcgaacttgcggaacttagcacacctggc
gtagaagttgctgggaagacgaccgtcgaaatcagtacactacaaaccaagcttattgct
caagaagaaggtcatttattcgatttagaacgggaattacttgttatccgagaagaaact
agtaaagcagttgaaaaagtgacgttagcgaaagaacagctactcgattggcataattta
gacttgtatacagaggaagtagcatcacttgaacaagcaatggattattataaaacgatg
gaagaacgagttgaaaaagcaaaaagagcgagtaatttacgttcacaagatgccctttgt
attcgtttaaaagaacaattacagacagcagaaatgactgaaaaacaagttaccaccgat
gctgaaaaagtagcagaacaatttgcaaacgctaaaaagcaaaaagaaatacttgctgaa
caagaagctgaatacgaaaaaaacaagcgtcatctgttccaactagaagaaatggaaccg
aaaattatcgaactggaaacaattaccgtgcaaaaacgtcgtgccgaattagcgtggaaa
gaacaagcagatattttacaaaaagtcataacgaatcagcaagcgctactggaagaacta
catttagcagaaacacagttgactgaaataacgaaggctgaattagccaatctagaagcc
atcaaccagcgaacaaccagcgaatcgctgatggaaaaaaaacaagaattgttaaataaa
cgaacaaaaatgattgcttgggagaaagaaaagcaatcagcagaacaaactttaacgcaa
cttttttctgaaaaagtaactatggaagcgatgataaaacaagaagaagcaaagttcgaa
aaagaacaagctgcgattcttgcagaacatctacatgacggagaagcttgtcctgtttgt
ggttctcatacgcacccagaactggcgacttggggggaggccgctaatgtagaaaaatta
gaagcagcaaaagcagatttacaagccaaacaattaacaatctctgctacagaaaaatcg
attagtcaactcgaatggcaattaaacgagtgggcagatattcaagatttaagtttagca
gaagtagaaaagcatttggcggaacaacagcaatcagcaaatgagctaacaaaacaaatt
gaggaattacaattaaaagttgctcaaaaagaaactatccaaacaaaaataaccacatta
aagaacaaacaaacggaagctgaatcagaattaaataatataggtcagcaagtggaaagc
ttacatcaacaggtgcaattaactacagggaagttgtcttatctagaacaatctatccca
tctagtatgcgagataaggctagctttgatcaacagaaaaacacgcttcaagcgaatatt
caaaaccataaagagaaaaaagagcgagtagatacagcttatcaacaagcggaaaaagaa
actacaagattagagtccactttaaccgttgccattaaaacaacagctgatgcgaagagt
gctttacaaatgcaacgagaaatttttaaagtggcaatgaaggaaaaccatttttcgaac
tatgaagattataaatatgctttactatcaaatgaggagttaaccagtcttgaggcgcaa
atatctgagtaccagaaaaaacgtcatttagcgatatctcgccaagcagatttaactgca
aaattaaaagataaacaaaagccaaatatcgaacaactagaaattttcatgaaagaaaaa
caacaaatattaacagaagtagaagaaaaaacaatgaggcaacgtcaactagtaacaaaa
cgtaaagaactcatagaaaattatcaaaaaagcattcaaactgtagaacaagcggaaata
agttatgcggatatcggtttgttgtctgatgtagcacgggggaaaaatccacgtagacta
acctttgaacgatatatattggctttatttttagatacgattattcaccgagcaaaccat
cgattatcgaaaatgaccagtgggcgatttgagctacggcgaaaaattgaaaaagctaaa
ggaaatgttcaaagtgggctagaattagaagtgtttgatgaatatacaggattaactcgc
catgtgaagacactttcgggcggagagagctttaaaacttcactggcacttgctttatct
ctagcagaagtggtacaagaaatggctggagggatttcacttgagacaatgtttattgat
gaaggttttggaacactcgatccagaatcacttgaagtagcagtggaatgtctactcgaa
actcaggaaaatggccgtcttgttgggataatctcacatgttccggagctaaaagagcgg
atttctgcaaggcttgaagtaaccgcaacaaaccatggtagtacaacaaaatttatgaca
tctaatagctaa
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