Entry |
|
Symbol |
gyrB
|
Name |
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
|
KO |
|
Organism |
lib Legionella israelensis
|
Brite |
KEGG Orthology (KO) [BR:lib00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:lib03032]
E4T55_07440 (gyrB)
03400 DNA repair and recombination proteins [BR:lib03400]
E4T55_07440 (gyrB)
Enzymes [BR:lib01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
E4T55_07440 (gyrB)
DNA replication proteins [BR:lib03032]
Prokaryotic type
DNA Topoisomerases
E4T55_07440 (gyrB)
DNA repair and recombination proteins [BR:lib03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E4T55_07440 (gyrB)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
1665707..1668124
|
AA seq |
805 aa
MSVDASYDSSNIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCKE
IFVTIHADESITVKDDGRGIPVDIHKEEGRSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV
GVSVVNALSEELHLLIRRHGNVYEQHYHNGIPESPLSITGESKTTGTQIWFKPSPVTFSN
IEFHYDILAKRLRELSFLNSGVCVHLHDERSEKQDTFRYEGGIRAFVEHLNRKKNAIMPM
VFAMSSEKDNIVVELSMQWNDSYQETIFCFTNNIPQKDGGTHLAGFRAALTRTLNNYIEK
EGFAKKAKVATTGDDAREGLTAVLSVKVPDPKFSSQTKDKLVSSEVKSVVESLVAEKFND
FLLENPAIAKAIVSKIIEAARAREAARRAREMTRRKGALDVAGLPGKLADCQEKDPALSE
LYLVEGDSAGGSAKQGRDRKFQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG
PDEYDPDKTRYHRIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIAQPPLYKIKR
GKQEHYIKDDEALYDYLSKNAIEGAEFYPAADAPPIASSALEELVMQYRRVEKIISKYKR
KYPAEVLKRISYLPGVYNDDINDKEKMANWVNQLHQSLQQLGHKSKKYSVEVYHHQENNH
YLPQITLTQHGTENIIKFNAEFFLSKDYKEMVNLGVKLIHLVDEGAVVKRGGKSQSVEAF
EEALDWLMEEAKRGQSIQRYKGLGEMNPEQLWETTMDPETRRMLQVSIEDAVAADEIFTT
LMGDHVEPRRDFIESNALEAENIDV |
NT seq |
2418 nt +upstreamnt +downstreamnt
atgagcgttgatgccagttatgattcatccaatattaaagttcttaaaggattggacgct
gttcgaaaacgtccgggaatgtacatcggcgatactgacgatggtacagggctacatcat
atggtctttgaagtcgttgataattccattgatgaagcacttgcaggttattgtaaggag
atatttgtcaccattcacgcggatgaatcgataactgttaaagatgacggtcgtggcata
ccagtggatatccataaagaagaaggacgctctgctgcggaagtgatcatgactgttctt
catgctggcggaaaatttgatgacaactcctataaagtttcaggcggtctgcatggtgtt
ggggtttcagtggtgaatgccctgtctgaagagctacatttgcttatacgacgacacggc
aatgtctatgagcaacattatcataatggcatacctgaatcgcctttatccatcactggc
gaatctaaaaccaccggcacacagatttggtttaagcccagtcctgtaactttttccaat
atcgaatttcattacgatatccttgctaaaaggctgcgggaattgtcctttttaaattcc
ggggtttgtgttcatttgcatgatgaaagatcagaaaaacaggatacttttcgctatgaa
ggagggatcagggcttttgttgaacacctcaaccgcaaaaaaaacgccattatgcctatg
gtgtttgcaatgtccagtgaaaaggataatattgttgttgaattatccatgcaatggaat
gattcttatcaggaaaccattttctgttttaccaataacatcccgcaaaaagatggtgga
acacatttggccggtttcagagcggctttgactcgcacattgaataattacattgaaaag
gaaggctttgccaaaaaagccaaggtagcaacgactggagatgatgctcgggaagggctc
acagcagttttatccgtcaaagtacctgatccaaaattttcttcccagacaaaggataaa
ctggtttcatccgaagttaaatcagtggttgaatcgcttgtggcagaaaaatttaatgat
tttcttttggaaaatcctgccattgccaaagccattgtcagtaaaatcattgaagcggcc
agagctcgcgaagctgcgcggcgagcacgtgagatgactcgacgaaagggagcgcttgat
gttgctggtctacctggaaagcttgcagactgtcaggaaaaagatccggcattatccgaa
ttatatctggtcgagggagattcggctggcggttctgccaagcaaggacgtgatcgcaag
tttcaagctattttgccccttaagggaaaaatactgaatgtggaaaaagcacgctttgac
aaaatgctctcatctcaggaagtggctacgttaattactgctcttggttgtggcatcggt
cccgatgaatatgatccggataaaacacgctatcatcgaattatcattatgaccgatgct
gacgtcgacggctcacatattcgaaccttattattgactttcttttaccgtcagatgcct
gaactaattgaacgaggttatatttatatagctcaaccgccactttataagataaaacga
ggcaagcaggagcattacatcaaagacgatgaagcactttatgattatttatcaaaaaat
gccattgaaggtgccgagttttatccggctgcggatgccccacctattgcttcttctgct
ttggaagaattggttatgcaatacagacgcgttgaaaaaatcattagcaaatataaaaga
aaatacccagcagaagtccttaaaaggataagctatttgccaggagtgtataatgatgac
atcaatgataaggaaaaaatggctaactgggttaatcaacttcatcagagtttgcaacaa
ttaggccataagtcaaaaaaatacagtgtggaagtgtatcatcatcaggaaaacaatcat
tatttaccacagataacgctgactcaacacgggacagaaaacatcattaaatttaatgct
gaattcttcttgtctaaagattacaaggaaatggttaatcttggtgttaaattgattcat
cttgttgatgaaggtgcagttgttaaacgtggggggaaaagtcagtcagtagaagccttt
gaagaggcgctggattggttgatggaagaagccaaacgtggacagagcattcagcggtat
aaaggtttgggtgagatgaatcctgagcaattatgggaaaccaccatggaccctgaaaca
agaagaatgttacaagtcagcattgaggatgctgttgccgccgatgaaatttttactacc
ctaatgggcgatcacgtcgaaccacgaagggattttatcgaaagcaatgctttggaagct
gaaaacattgatgtctaa |