Legionella israelensis: E4T55_09015
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Entry
E4T55_09015 CDS
T05938
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
lib
Legionella israelensis
Pathway
lib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E4T55_09015 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lib03021
]
E4T55_09015 (rho)
03019 Messenger RNA biogenesis [BR:
lib03019
]
E4T55_09015 (rho)
Transcription machinery [BR:
lib03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
E4T55_09015 (rho)
Messenger RNA biogenesis [BR:
lib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
E4T55_09015 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
OB_RNB
AAA_22
S1CSD-TOTE-2
NACHT
TAD2
Motif
Other DBs
NCBI-ProteinID:
QBS09981
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All DBs
Position
1982559..1983821
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AA seq
420 aa
AA seq
DB search
MNLSELKQLPIADLVNIAQEMGVENTSRMRKQDIIFTILKSHAQKGEDIYGDGVLEVLSD
GFGFLRSADGSYLAGPDDIYVSPSQIRRFGLRSGDTISGKIRPPKDNERYFALLKVDKIN
YESPESSKRKILFENLTPLFASERLVMEQGNGSTEDLTARVIDLCAPFGRGQRGLIVSPP
KAGKTLMLQNMARSIEKNYPECYLIVLLIDERPEEVTEMQRSVKGEVVASTFDEPANRHV
QVAEMVIEKAKRLVEHKRDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRL
YGAARNIEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMEIHLSRNIAERRVFPAINI
NRTGTRREDLLLSPEDLHRTWILRKILQSMDECDAIEFLLERMKNHKTNAEFFEAMKRQE
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttagtgaattaaagcaactacctattgctgatctcgttaatattgcccaggaa
atgggtgttgaaaacacctcccgtatgcgtaaacaggacatcatttttaccatcttgaag
tctcatgcccaaaaaggcgaagacatttatggtgacggtgttcttgaggtcttgagtgat
ggatttggttttttacgctcagccgacggttcttatctggccggtcctgatgatatctat
gtttctcccagtcaaatcaggcgtttcggattgcgttccggtgatacaatttcaggaaaa
attcgtcctccgaaagataatgagcgatattttgctttattaaaagtggataaaatcaat
tacgagtcaccggaaagctcaaaacgtaaaattctctttgaaaacctgactcctcttttt
gcttccgagcgtctcgttatggaacaaggcaatggcagtacggaagatctcactgcccga
gtcattgatttgtgtgctccattcggtcgaggtcagcgtggcttgattgtttctccacca
aaagccggtaagactctgatgttgcaaaacatggcacgctcaatagaaaaaaattatccg
gagtgttatctcattgttctgcttattgatgagcggcctgaggaagtcactgaaatgcag
cgttcagtgaaaggagaagttgtggccagtacttttgatgagcctgcgaatcgacatgtt
caggttgctgagatggtcatagagaaagccaagcggcttgttgagcataaacgtgatgtg
gttattttactcgattccattacccgattggcccgtgcttataacactgtagttcctgca
tcgggtaaggttttaacgggtggtgtggacgcgaacgctctgcaacggcctaagcgcctc
tatggggctgcacgaaatattgaagaaggcggtagcctgaccatcattgctaccgcactg
gtggatactggttcgaaaatggatgaagtgatttatgaagaatttaaaggaacaggtaat
atggagattcatttaagccgcaacattgccgaacgtcgcgtattcccggctatcaacatc
aatcgtaccggaacccgccgtgaagatctgttgttatctcctgaagacttgcatcgtacg
tggattttgcgaaaaatattgcaatccatggatgagtgtgacgctattgaattcctcctg
gagcgaatgaaaaatcacaaaaccaatgctgaatttttcgaagccatgaagcggcaagaa
taa
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