Legionella israelensis: E4T55_10255
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Entry
E4T55_10255 CDS
T05938
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
lib
Legionella israelensis
Pathway
lib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E4T55_10255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lib03019
]
E4T55_10255
03009 Ribosome biogenesis [BR:
lib03009
]
E4T55_10255
Enzymes [BR:
lib01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
E4T55_10255
Messenger RNA biogenesis [BR:
lib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
E4T55_10255
Ribosome biogenesis [BR:
lib03009
]
Prokaryotic type
rRNA processing factors
E4T55_10255
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
QBS10202
LinkDB
All DBs
Position
2257516..2259468
Genome browser
AA seq
650 aa
AA seq
DB search
MGLPMEKMLINAIQSEEVRVALIKNNHLFDLDIECPSEIKKKGNIYKAIVTRREPSLDAV
FVEYGAKRQGFLPLKEIAPEYLSKHPDEFGDEKPPVTALIREGQELLVQVDKEERGSKGA
ALTTYITLAGCYLVLMPNNPHSGGISRRIEGEEREELRETLNALNLPEEMGLIIRTAGVG
KSQEELQDDLNMLCNQWQAIKQAYDSELAPCLIHQEGDVIIRSIRDNLRKSISEIIIDDQ
VSYIKAKKYIEHIKPEFLPHLKLYNSTIPLFNYYQIESQIETAYQREVLLPSGGALVIDR
TEALVSIDVNSAKATSGSDIETTALNTNLEAANEIARQLRLRDLGGLVVIDFIDMSSSKN
QREVENRLKEALQADRARIQVGRISRFGLLEMSRQRLRLSLGESAQEVCPRCEGRGTVRN
IQSHALSIVRLIEEEALKEKTAEIQVQLPVEMATFLMNEKRNFILNIEKRHGVSAIIIAN
PYMQTPQYSITRLKEDNVGKSKKASYTLIQQPEVHFVSAKENVKHDEPVVKAFSGRLSGK
QQQAGFIKRLWSSLFGGSTEPSSQVEETKEKKTSSKVDSSAKPQTQGERRPKSQSNRKRR
SGGGQSRSGSGSQRRRPSQSQSGQQGNRQGASKPEQKKKTANREITEKQS
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggggttaccaatggaaaaaatgttgatcaatgcaattcagtctgaagaagtccgggtt
gctttaataaaaaataatcatttatttgatctggacattgagtgtccaagcgaaattaag
aaaaaaggaaatatttataaagcgatagttacacgacgtgaaccaagtcttgatgctgta
tttgttgaatatggcgcaaaacgtcagggatttttaccgcttaaggaaattgctccggaa
tatttaagtaaacatcccgatgagtttggcgatgaaaaacctccagtcactgcattaatt
cgtgaagggcaggaactgttggttcaggtggataaagaagaaagaggaagtaaaggagct
gctttaaccacttatattacgctggctggatgttatctggttcttatgccaaacaatccc
cattcaggcggtatttcgcgacgtattgaaggtgaagagcgtgaggaattgcgtgaaact
ttaaatgcgctgaatctgcccgaagaaatgggacttatcattcgtacggcaggagtagga
aagagccaggaagaattacaagatgatctgaacatgctttgcaatcaatggcaagctatc
aaacaggcctacgattcagaattggctccttgccttattcatcaggaaggggacgttatt
attcgttccattcgtgataatctgcgtaagtcgatcagtgaaatcatcattgatgatcag
gtgtcctatattaaagccaagaagtatattgagcatattaaacctgaatttttacctcat
ctgaaactctataacagcacaatacctttatttaattattatcagattgaaagtcagata
gaaacggcctatcaacgagaagttttgttgccttccggcggcgctctcgtgattgatcgt
actgaagcgctggtatccatcgatgtgaactcagctaaagccacaagtggctcagacatt
gaaaccacggctttaaataccaatcttgaggcagccaacgaaattgcccgtcaattgcgt
ttgcgtgatcttggtggtctggtggtgatcgattttatcgacatgagctccagtaaaaat
cagcgtgaggtggaaaaccgcttaaaagaagctttacaggcggatcgggctcgcattcag
gttgggcgtatttcccgctttggtttgctcgagatgtcgcgccaacgccttcgtctttct
cttggagaaagtgcacaggaagtttgtcctcgttgtgaaggtcgaggtacagtaagaaac
atccagtcacatgctctgtccattgttcgtttgatcgaagaggaagccttgaaagaaaag
acggcggaaatacaagtgcagcttcctgtcgagatggccactttcctgatgaatgaaaaa
cggaacttcattttgaacatagagaaacgtcatggtgtatctgctattatcattgccaat
ccttacatgcaaacgcctcaatattccattacacggcttaaggaagataatgtaggtaaa
agcaagaaggcaagttataccttaattcagcagccggaagttcattttgtatcggccaag
gaaaatgtaaaacatgatgagcccgtggtcaaagccttttccggccggttgtctggtaag
caacagcaagccggtttcatcaaacgtttgtggagcagcttatttggtggaagtactgaa
ccttcttcacaagtggaggaaacaaaggaaaaaaagacttcatcaaaagtcgattcatca
gcaaaacctcagactcagggcgaacgacgtccaaaaagtcagtccaatcgtaaacgccgc
tcgggaggcggacaatcaagatcaggatctgggtcacaacgtagacgtccttcgcaaagc
caatcagggcaacaaggaaatcgccagggggcttccaagcctgagcaaaaaaagaaaacg
gcgaatcgagaaatcacggaaaagcagtcatag
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