Legionella israelensis: E4T55_12350
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Entry
E4T55_12350 CDS
T05938
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lib
Legionella israelensis
Pathway
lib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E4T55_12350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lib03019
]
E4T55_12350
03009 Ribosome biogenesis [BR:
lib03009
]
E4T55_12350
Enzymes [BR:
lib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E4T55_12350
Messenger RNA biogenesis [BR:
lib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E4T55_12350
Ribosome biogenesis [BR:
lib03009
]
Prokaryotic type
rRNA helicases
E4T55_12350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
NMT1_2
ERCC3_RAD25_C
adh_short
bHLH_PER
DUF3256
Terpene_syn_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QBS10566
LinkDB
All DBs
Position
complement(2685681..2687375)
Genome browser
AA seq
564 aa
AA seq
DB search
MTQESLTFSSLNLSNELLKTLEEMKFHTPSAIQAKTIPPLLEGKDVIGLAQTGTGKTAAF
ALPILQGLSDKIKNTQALILTPTRELAIQVADQIETLSRYQKNSTVAILCGGQDYRRQLK
QLRDGAKVVVGTPGRILDHIERGSLQLGQLSTFVLDEADEMLRMGFIEDVETILAQLPEK
KQMALFSATMPSRIRHIAQNYLNDPVSIEIQSKTATVKTIEQKFLFASGTQKSAALLRVL
AVEDFQGVIVFVKTKSSTEEVAQVLQQQNYRAMAIHGDISQNQREYIITQFRQGTIDILV
ATDVAARGLDVDRITHVINFDIPFDCETYVHRIGRTGRAGRSGTAVLFVTPKETRMLNMI
ERHTRQRIEKMFIPDDRQIKTARKKKFMAKITERLQHENIKDYLSLIEEYITVQPTTSAM
HVAAALALLANQDESLQEELRLPQVSDPVKDKPRKHKADRSYSEDKPSRSTRRSNRERSS
GDPQQDQDLFRIDIGRVHGVKPGNIVGAIANEAGLLGRQISGLKIHADHSTVRLPKGLPK
NIVKDLTKAWVCGRQLNLSLIDKA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgactcaagaatcgctcacattttcctcgcttaatttgtccaatgaattgttaaaaacc
ctggaagaaatgaagtttcatacaccttctgccattcaagcaaaaaccatcccaccctta
cttgaaggaaaagatgtcattgggcttgcgcaaacaggcacgggaaaaaccgccgctttt
gctctgcccattctgcaaggtttatcagataaaataaaaaacacccaggctctaatattg
acaccgacacgtgaattggccatacaggtggctgaccaaattgaaacgttaagccgttat
cagaaaaattccaccgtagcaatcctttgtggcggacaggattaccgacgtcagttaaaa
caacttcgtgacggcgccaaagtggtcgtggggacccctggcagaatacttgatcatatt
gagcgtggcagtttgcaacttgggcaattgtcaacttttgttctagatgaagccgatgaa
atgttacgcatgggatttatcgaagatgtcgaaaccatcctcgcccaattacctgaaaaa
aaacaaatggctttattttctgccaccatgccttcccgcattcgtcatattgcgcaaaat
tatttaaatgacccagtctctattgaaattcagtctaaaacagcgacagtaaaaaccata
gaacaaaaatttttatttgcctctggcactcaaaaatcagccgcgttgctgagagttctg
gccgtagaagattttcagggcgttattgtctttgtcaaaacaaaaagcagtacagaagaa
gtggctcaagttctgcagcagcaaaattatcgcgccatggccattcacggtgacatcagt
caaaatcagcgtgagtatatcatcactcagtttcgccagggcactattgatatccttgta
gccaccgatgttgcagcgcgaggactcgacgtcgaccgtataacgcatgtcattaatttt
gatatcccttttgattgtgaaacttatgtgcatcgaatcggtcgtacaggcagagccggg
cgcagcgggacagctgttttgtttgtgacccccaaggaaacccgcatgctgaatatgatc
gagcgacatactcgccagcgcattgaaaaaatgttcatccctgatgatcgtcaaatcaaa
acagcgcgaaaaaagaagtttatggcaaaaattaccgagcgtttgcagcatgagaatatt
aaagattatttgtctttgattgaagaatacatcaccgttcagcctactacttccgccatg
catgttgcagctgccttagccttactggctaatcaggatgaatcgttgcaggaagagctg
aggctgcctcaagtctctgaccctgtaaaagataaaccgcgaaaacacaaagcagatcgt
tcttattcagaagacaaaccttcacgttcgacccgtcgctcaaatcgtgagagaagcagt
ggtgatccccagcaagaccaggatctttttcgcattgacatcggcagggtccatggagtc
aaaccaggaaatatcgttggcgctattgccaatgaagcagggcttttaggaagacaaatc
agtggattaaaaattcatgccgatcactcaactgtacgtttacctaaaggattacccaaa
aacatagtcaaagatctgaccaaagcctgggtctgtggccgacaacttaatcttagctta
attgataaggcttaa
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