Leptospira interrogans serovar Copenhageni: LIC_10132
Help
Entry
LIC_10132 CDS
T00166
Name
(GenBank) sigma 54 activator
KO
K02584
Nif-specific regulatory protein
Organism
lic
Leptospira interrogans serovar Copenhageni
Pathway
lic02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lic00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LIC_10132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lic03000
]
LIC_10132
Transcription factors [BR:
lic03000
]
Prokaryotic type
Helix-turn-helix
Other families
LIC_10132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
GAF_2
GAF
Sigma54_activ_2
GAF_3
HTH_8
AAA
AAA_5
AAA_2
Mg_chelatase
TIP49
AAA_16
AAA_22
MCM
nSTAND3
AAA_3
AAA_19
AAA_7
ATPase
Motif
Other DBs
NCBI-ProteinID:
AAS68765
UniProt:
Q72W09
LinkDB
All DBs
Position
I:157135..159234
Genome browser
AA seq
699 aa
AA seq
DB search
MSGYVKPSPLRSIQEVATAMNSTLDPDKLLDLILERCIQICEVGSGSLMLINEKENVLDI
VTFRGMNPSVRTKVKLKVGEGITGIVAASGEGMIVSDVTANPHYISIKDDIMSELAVPMI
VEDVVIGVISLDSSRKGAFNEEHLEIISTLANQAAQIFKNLQIFRQLEQKNKIQQVLIDI
SRTVTSTLVLQEIFEDIMDRLEKSLNLERGSIVLFEPEKAILKLEAASGLTAEEMEKGVY
LPGEGVTGKVFETGEPIIIESIANDENFINRVGNAAHFKNNPENVSFLAAPIKSDTDVLG
VVSVYFVHKKYIDLKTYLDFLQVVASVIYQAIRIQKLIDEEKREISRENVLLKRELKNKY
KFGSLIGKSKPMEKLFEMIHLVSDSRASVLITGESGTGKEMIASAIHYNSSRADKPFIKI
NCAAIPENLLESELFGHKKGSFTGAVSDKKGKFEMADTGTIFLDEIGEMDLNLQSKLLRV
LQEKEIEAVGSVKPKKIDVRVIAATNADLEKLISEKRFRPDLFYRLNVVNMVTPPLRERS
DDIPLLINHFIAKYAEENGKKITGVTREAHKLLMNYSWPGNVRELENVIERAVVLSQLEM
LDIQDFSEINGRLLYGDEDFDPETGDSESSVEIANSRFSSSNLDALDGRAIEVVVGEVEA
RLIKYAMKKFKYTKTRVAKFLGINRNTLDKKIKDLKIDY
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggatatgtgaagcctagccccttaagatctatacaagaagttgctacggcaatg
aattctaccttagatccggataaacttctggatttgattttagaacgttgcattcagatt
tgcgaagtaggctccggctctttgatgttgattaatgagaaagaaaacgttttagatata
gtgacttttcgtgggatgaatccttccgttcgaactaaggtaaaactgaaagttggagaa
ggaatcaccggaattgtagccgcgtcgggcgaaggtatgatcgtaagtgatgttaccgct
aatccacattacatttccataaaggatgatattatgtcggaacttgcggttccgatgatt
gttgaagacgtagtgatcggagtaatttctttggactccagtcgtaaaggagctttcaac
gaagaacatttagaaattatttctactcttgctaatcaagctgcccagatttttaagaac
ttacaaatttttagacaactcgaacaaaaaaataaaattcaacaagtgctaattgatatt
tccagaactgttacttccactttggttctacaggaaatttttgaagatattatggatcgt
ttggaaaaatccctaaatttagaacgcggaagtattgttcttttcgaacctgaaaaagcg
attttgaaattggaagcagcctccggtttaactgcggaagaaatggaaaaaggggtttat
cttccaggagaaggtgttactggaaaggtttttgaaacaggggaaccaattatcatcgaa
tctattgcaaatgacgaaaattttataaaccgagttggaaatgcggctcattttaaaaat
aatccggaaaacgttagttttcttgcggctcctatcaaatcggatacggatgtcttggga
gtggtaagcgtttatttcgttcataaaaaatacatcgatttaaaaacttatttagatttt
ttgcaagtagttgcatccgtaatttatcaagcgattcggattcaaaaactgatcgacgag
gaaaaaagggagatttcgagagagaacgttcttctcaaaagagaattaaagaataaatat
aaatttggttctttgatcggtaaatccaaaccgatggaaaaacttttcgaaatgattcat
cttgtttccgattctagagcttctgttttgattactggagaatctggtaccggtaaagaa
atgattgcctctgcaattcattataattcttctcgcgctgataagccttttatcaagatc
aactgcgctgcaattcctgaaaacttacttgagagcgaactctttggccataagaaaggt
tcttttacgggagctgtttcggataaaaaaggtaagttcgaaatggcagataccggaaca
attttcttggatgaaatcggagagatggatctcaatttacaatctaaacttttgagagtt
ctgcaagagaaagagattgaagccgtcggttctgttaaacctaaaaaaattgacgtaagg
gtaatagcggcgactaacgcggatttggaaaaattaatttctgaaaaaagattcaggccg
gaccttttttacagactaaacgtcgtaaatatggtaactcctcctcttcgtgaaagatcg
gatgacattccacttttgatcaatcactttattgcaaagtatgccgaagaaaacggtaaa
aaaattacgggagtcacgagagaggctcataaacttttgatgaattacagttggcctgga
aatgttcgagaacttgaaaatgtaatagaacgtgcggttgtactttctcaactagaaatg
ttggatattcaagatttttctgagatcaatggacgtcttctttacggagatgaggatttt
gatccggaaactggggattctgaatcttctgtagaaattgccaattctagattctcctcc
tcaaatttggatgcgcttgatggaagggctatcgaagttgtagttggagaagtagaagcc
cgtttgattaaatacgcgatgaagaagttcaaatatacaaaaacaagagttgctaaattt
ttaggaatcaatcgaaatactttggataaaaaaatcaaagatctcaaaatcgattattga
DBGET
integrated database retrieval system
