Leptospira interrogans serovar Copenhageni: LIC_10464
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Entry
LIC_10464 CDS
T00166
Symbol
ligB
Name
(GenBank) Ig-like repeat domain protein 3
Organism
lic
Leptospira interrogans serovar Copenhageni
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_2
Motif
Other DBs
NCBI-ProteinID:
AAS69085
UniProt:
Q72V39
Structure
PDB
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All DBs
Position
I:complement(526395..532067)
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AA seq
1890 aa
AA seq
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MKKIFCISIFLSMFFQSCMSWPLLTGLVGLTAGKKSNGLSFFHLLLGNFNPTITRIELSY
QDSSIANGTSTTLEVTAIFDNGTNQNITDLTSIVPDSQSVVTIEGNRVKGIASGSSIIKA
EYNGLYSEQKITVTPAILNSIQVTSLESGILPKGTNRQFSAIGIFSDGSHQDISNEPLIV
WSSSNPDLVRVDDSGLASGINLGTAHIRASFQSKQGAEEMTVGDAVLSQIQVTSNDLNIP
LGKKQKLTATGIYSDNSNRDISSSVIWNSSNSTIANIQNNGILETADTGIVTVSASSENI
IGSVKLIVTPAALVSISVSPTNSTVAKGLQENFKATGIFTDNSNSDITDQVTWDSSNTDI
LSISNASDSHGLASTLNQGNVKVTASIGGIQGSTDFKVTQAALTSIEVSPTRTSIAKGLT
QKFTAIGIFTDNSKKDITDQVTWNSSSAIVSVSNLDNNKGLGKTNSVGNTTITATLGKVS
GNTWFTVVPAVLTSIQINPVNPSLAKGLTQKFTATGIYSDNSNKDITSAVTWFSSDSSIA
TISNAQKNQGNAYGAATGATDIKATFGKVSSPVSTLSVTAAKLVEIQITPAAASKAKGLT
ERFKATGIFTDNSNSDITNQVTWNSSNTDIAEIKNTSGSKGITNTLTPGSSEISAALGSI
KSSKVILKVTPAQLISIAVTPINPSVAKGLIRQFKATGTYTDHSVQDVTALATWSSSNPG
KAMVNNVTGSVTTVATGNTNIKATIDSISGSSVLNVTPALLTSIEITPTINSITHGLTKQ
FKATGIFSDKSTQNLTQLVTWISSDPSKIEIENTSGKKGIATASKLGSSNIKAVYKFIQS
SPIPITVTDLKLKSITISPSSSSIAKGLTQQFKAIGTFIDGSEQEITNLVTWYSSKSDVA
PINNAANAKGLATALSIGSSNISAIYNSISSNKINFNVSAATLDSIKINPVNNNIAKGLT
QQYTALGVYSDSTIQDISDSVTWSSSNSDSISISNSTETKGKATALQIGNSKITATYNSI
SENIDITVSAATLSSISISPINTNINATVSKQFFAVGTYSDGTKADLTSSVTWSSSNKSQ
AKVSNASKTKGLVTGIASGNSIITATYGSVSGNTILTVNKTDTIAPTVQSVVSLSPTTIQ
VVYSESINNKEALDLSNYKIIDSSNFIGHCSDNTDFNSNSQTADFSLSSIKGSKNTFTIT
LSHSQILNKSYTLVVNKQGIHDLSSIPNSLSCPNNSDFIGKEQLKLTSAVCNSLNQVIVS
FSKPLYSGKEATKSVECSNPSQCESRYKFAGVSSLGSITSVRILDGKVCGGAPADSSKIC
LTHSLLQSGGQYTIIAANDLNGDGFDNKSWGAIRDSFDQENLQSSPKDRINFIGCGNSPL
NFMDGPIMSDPFGDGSDFGFLVDYNNQIYLGPNVKGNQAARFNYDGTFPESIFFSFTKDI
NADNRASSRDGGIPVPNYVTIGHTGCTLNSADITTGCGPDNEDGRGVFAIGSLNKKSHIF
IAGSRPRRFDYLYYSSDTDTNLNFKYIDMGEITGTATAGTSSIAVIDDRIHVGFAKKNKN
LNAPDFGKITFNTSDQNRCAAGNNCDASDGYRGNRFRIDRMPYFGGLSVEDADNYETYTS
DNSSINWGYYVGIDSLFVFKEKLYAANGGFPNSLHNGSIIHSTSANPSPCEGSNRCSSWK
DTAPRSNPKWHNSPHNNWFSLELTKYRNLIPADKAFSQFAEFNGRLYVTRTICVTKEDHS
GLRQSLQTVEGCTDGSYTNRRPQLWKCDPTLTGDTTTCEAEDWSLVGDNGTGFTNFGDNS
NHSMTMMVASGSYLYIGFDNENGIQIWRTNLENPGSSSHNWEPIGIGGLRDVTNRQIYSA
ISGMNFGVNFVYISVGNKNKPVKIYRQQNQ
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaatattttgtatttcgatttttctttcgatgttttttcaaagttgtatgtct
tggccacttttaaccggtctggtaggattaaccgctggtaaaaaaagtaatgggctgtcc
tttttccaccttctgttaggtaacttcaatccgactattacaagaatcgaacttagttat
caagattcttctatcgcaaacggtaccagtacaaccctagaagttaccgcaatctttgat
aacggaacaaatcagaatattacggatttgacatccatcgtccccgattcccaatccgtt
gtaacaatcgaaggcaacagagtcaaaggaatcgcttctggttcttccattataaaagca
gaatacaacggcctatactctgaacaaaaaattaccgttacaccagccattcttaactca
attcaagttacgagtttagagtcaggtatactacctaaaggtactaatcgtcaattctca
gccatcggtatcttttcggatggttctcatcaggatatttccaacgaaccactgatcgtt
tggtcttccagtaatcctgatttggttcgagtagatgattcagggttggcatcagggatc
aatttaggaacagctcatattcgtgcatcctttcaatcaaaacaaggggctgaagaaatg
accgttggagatgctgttctctctcaaatccaagtaacttcaaacgatctgaatattcct
ctcggaaaaaaacaaaaactaacagctacgggaatctattcggataactctaacagggat
atttcctcttctgttatttggaattcttctaattccactatcgctaatattcaaaacaac
ggaatattagaaacagctgatactggtattgtcactgtttctgcttctagcgagaatata
atcggatccgtaaaactaatcgttactccagcagccttagtttctatttctgtttctccg
acaaattctacagttgcaaaaggtttacaagaaaactttaaagctacagggatctttaca
gataattcaaactcggatattaccgaccaagttacttgggattcttctaataccgatatt
ctctcaatttccaatgcaagtgatagccacggattagcttccacactcaaccaagggaat
gttaaagtcactgcttccatcggtggaatacaaggatccactgattttaaagttacacaa
gctgcattgacttccatcgaagtctctccaactcgcacttccattgcaaaaggactaact
caaaagtttactgcgatcgggatttttacggataactctaagaaggatattacggatcaa
gtcacttggaattcttcttcagcaatcgtaagcgtgtctaacttagacaacaataaaggt
ctgggaaaaaccaactcagttggaaacacgactattaccgcaaccttaggaaaagtttca
ggtaacacttggtttactgtagttcctgcggttctcacttctattcaaatcaatcctgta
aatccttctcttgcaaaagggttaactcaaaaatttacggctactgggatctactctgac
aactctaacaaggacattacttccgctgttacgtggttctcatccgattcttcaatcgcg
acgatttcaaacgcccaaaaaaatcaaggaaacgcttacggagcagctacaggagcaacg
gatattaaagccacattcggaaaggtaagtagtccggtttctacgttatctgttacagct
gcaaagcttgttgaaatccaaatcacaccggctgctgcttccaaagcaaagggactcaca
gaaagattcaaggctactggtatctttacggataactcaaattccgatattacaaatcaa
gttacctggaattcctctaatacggatattgctgaaattaaaaataccagtggaagtaaa
ggtattacaaatacactcactccaggatcgagtgaaatatccgcagccctcggttcaatc
aaaagttctaaagtaattttaaaggtaactccggcacaattgatttccattgccgtaaca
cctataaatccgtcagttgcaaaaggtctaatacgacaatttaaagccaccggaacatat
acggatcattccgtacaagacgtgactgccctagctacctggtcttcttccaatcccgga
aaagcaatggttaacaacgttacaggttcggttacaacagtggctaccggaaatacaaat
attaaagcaacgatagactccatatctggctcttccgttttgaatgtcactcctgcactt
cttacttctatcgagataacaccgacgattaactctatcactcacggtcttacaaaacaa
tttaaagcgactggtatcttttcagataaatctactcaaaatttgactcagcttgtaact
tggatttcttccgatccatctaagattgagatcgaaaacacttccggtaaaaaaggtata
gcgacagcctctaaattaggaagttcgaatattaaggccgtctacaaattcatccaaagc
tccccaattccgattacagtcactgacttaaaactgaaaagtataactatcagtccttcc
tcaagttcaatagccaaaggattgacccagcaatttaaagcgatcggaacttttatagat
ggctctgaacaagaaattacgaatcttgtgacctggtattcttccaaatccgacgttgcc
cctatcaataacgctgccaatgcaaaaggtttagcaaccgcactttcaataggttcttcc
aacatctctgcgatttacaattctataagcagtaataaaataaattttaatgtaagtgct
gccacgttagattccattaaaatcaatccagtcaacaataacatcgccaagggacttacc
caacaatatactgcgcttggcgtttattcagactccaccattcaggacatcagcgattca
gttacctggtccagttccaattctgactcgatcagcatctctaattcgaccgaaaccaag
ggaaaagcgaccgctttacagattggaaacagcaaaatcactgcgacttacaattccatc
tcggaaaacatagacataacggtcagcgcagcaaccctttcttcgatttcaatatctcct
atcaatacaaatataaacgcaaccgtatcaaaacaatttttcgcggtgggaacgtattcg
gatgggaccaaagcggatttaacttcttcggttacatggtccagctcaaataaatctcag
gcaaaggtgagtaacgcatctaaaacgaaaggattggttacagggattgcttctggaaac
tctataatcacagcgacctacggttcagtatctggaaatacaatcctcacagtaaacaaa
acggacacgatagctccaacggttcaatcggtagtttccttatcacctactaccatccaa
gttgtatattcagaatccataaacaataaggaagcccttgatttatccaattacaaaata
attgatagttccaattttataggacattgttcagataatacggacttcaattccaattct
caaaccgcagatttttctcttagtagtatcaaaggaagtaaaaatacttttacgatcaca
ctttcacattcacaaatcttaaacaaatcatacacacttgtagtcaacaaacaaggaatt
cacgatctttcttccattccaaattccttaagttgtccaaataactctgattttatagga
aaagaacaactcaaacttacaagtgcagtttgtaattccttaaaccaagtgatcgtttct
ttttccaaacctttatattcgggaaaggaagcaacaaaatccgtggaatgttcaaatccg
tcccagtgtgaatccagatataaatttgcaggtgtgtcttcattgggaagtattacgagc
gttagaattttagatggaaaagtatgcggtggagcaccggcagactcctcgaaaatatgt
ttaacacactcccttcttcaatcaggtggtcaatatacgatcatcgccgcaaatgatttg
aacggagacggctttgacaacaaatcctggggagcaattagagattcattcgatcaagaa
aacctacaatcttctccgaaagatagaatcaactttataggttgtggaaattcccctctc
aactttatggatggcccgatcatgtcagatccttttggagacggttccgatttcggcttt
cttgtagattacaacaatcaaatctatctaggaccgaatgtaaaaggaaaccaagcagct
cgattcaattacgacggaacttttcccgaatctatttttttctcttttaccaaagatata
aatgccgataaccgtgcgtcttcaagagatggaggaattccggttccgaattacgttacg
atcggtcataccggttgtactctcaatagtgcagacattactactggatgtggtccggat
aacgaagatggacgtggagtttttgccatcggatcattaaacaaaaaatctcatattttt
atagcaggttcaagaccaaggagattcgactatctctattattcctcagataccgataca
aatcttaattttaaatatatcgatatgggagaaattactggaacggcgactgcaggaact
tcatctatcgcggttatagacgatcggatccatgtgggttttgcaaaaaaaaataaaaat
ctaaacgcacctgatttcggtaaaatcacctttaatacatccgatcaaaatagatgtgca
gccggaaacaattgtgacgcctctgacggataccgcggtaatcgttttagaatcgataga
atgccttatttcggcggcctctccgtggaggatgcagacaattatgaaacttatacatct
gataactcctcgatcaactggggttattatgtgggaatagattctctattcgtttttaaa
gaaaaactttacgccgcaaacggaggatttccaaattcactacataatggaagtataata
cactctaccagtgcaaatcctagtccttgtgaggggagcaatcgttgttccagttggaaa
gacacagcacctagatccaatccgaagtggcataactctcctcataacaattggttttca
ctggagcttacaaagtatcggaatttaattccggcggataaagcattctctcaattcgca
gaatttaacggaagattgtatgtaacaagaacgatctgcgtaacgaaagaagatcactcc
ggactcagacaaagtttacaaactgtggaaggttgtacggacggaagttatacaaatcga
agaccccaactttggaaatgtgatccgactctaaccggcgatacaacaacctgcgaagca
gaagattggtctttagtaggagataacggaaccggatttacaaactttggagacaattcc
aatcacagtatgacgatgatggttgcaagtggatcttatctctacataggttttgataac
gaaaacggaattcaaatctggagaacaaatcttgaaaatcctggaagttcatcacacaac
tgggaacctataggaataggcggattaagagacgttaccaatcgtcaaatttattcggct
atatccggaatgaattttggtgtaaatttcgtatatataagcgtaggaaacaaaaataaa
ccggtcaaaatttacagacaacagaatcaataa
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