Leptospira interrogans serovar Copenhageni: LIC_10738
Help
Entry
LIC_10738 CDS
T00166
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
lic
Leptospira interrogans serovar Copenhageni
Pathway
lic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LIC_10738 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lic03019
]
LIC_10738 (rhlE)
Enzymes [BR:
lic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LIC_10738 (rhlE)
Messenger RNA biogenesis [BR:
lic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LIC_10738 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
UvrD-helicase
CMS1
Motif
Other DBs
NCBI-ProteinID:
AAS69357
UniProt:
Q72UC1
LinkDB
All DBs
Position
I:899573..901195
Genome browser
AA seq
540 aa
AA seq
DB search
MKFEELSIHPKLLSAIQEIGYTELTPIQEKSIPHGLEGKDITGLAQTGTGKTVAFLIPVI
HNILTKGIQGIAALVLAPTRELTMQIAEEAKKLLKHSEGIRSVPIIGGTDYKSQNKDLEG
LNGIIVATPGRLIDMIKSGSIDISNVEFFVLDEADRMLDMGFIQDIRWLLHKCKNRKQTL
LYSATLSVEVMRLAYRFLNEPVEIQINPEKIITERIDQKIVHLGREEKIPYMTNLIINSK
EEGQGIIFTNYKANIPKIVYTLRKYGVPVTGISSELDQKKRLRLLRDFKSGKYRYMVATD
VASRGIDVENIDIVYNYDLPQDTENYVHRIGRTARAGRKGKAIGFCSESDYVELEKIEKY
LKQKIEILEVNEEYIQFPAGDFQSFIGGDSYDREKETHFKQNGKRPHDNDRAPHKHDRNR
KRDKRHTSHTHSTAKDSHKKKPAAAIQEAELFLQKADSVLSSEPKGKKSAKDQHRFQNKD
KQSRTGRGAQNSRNQNKNQQFGKQYDKNKRNLFDINDTVKEDTKKKKVSIWQKIKSIFGG
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgaagaactatccatccatccaaaattactttctgccattcaagaaatcgga
tatacggaactaactccgatccaagagaaatcgattccacatggattggaaggaaaagat
attaccggacttgcacaaaccggaaccggaaaaaccgtcgcgtttttaattcctgtcatt
cataacattctaaccaaaggaatacaaggaattgcagcgctcgtattagctcccacaaga
gaacttacgatgcagatcgcggaagaggcaaaaaaattactcaaacattccgaaggaatc
cgatcagtcccgattataggaggaaccgattacaagtcccaaaataaggatttagaagga
ttaaacggaattatcgtcgctactcccggaagattaatcgatatgattaagtctggttct
attgatatatcgaacgtagaattttttgtactcgatgaagcggatcgaatgttggatatg
ggatttatccaagacatccgttggcttttacataagtgtaagaatcggaaacagaccttg
ttgtattccgctactttgtctgtggaagtgatgaggctcgcctatcgtttcttaaacgaa
ccagtagaaattcaaatcaatcctgaaaagattatcaccgaaagaattgatcagaaaatt
gttcatttgggaagagaagaaaaaattccttatatgaccaatctaatcataaactcaaaa
gaagaaggtcaagggatcatattcacaaattataaagcgaatattccaaaaattgtatat
actctccgtaaatatggggttccagtaaccggaatatcttccgaattggatcagaaaaaa
agacttagacttctccgagattttaaatccggaaaatacagatacatggtcgcaaccgac
gtcgcttccagaggaattgacgtagaaaatatagatatcgtctataattacgatcttcct
caggataccgaaaattacgtacacagaatcggtagaactgcacgggcgggaagaaaagga
aaagcgattggtttttgttccgaatcagattacgtggaactagaaaagatagaaaaatat
ctaaaacaaaagatcgaaattttagaagtaaacgaagaatatattcagtttcctgcaggt
gattttcaatcttttattgggggggattcttacgatcgagaaaaagaaactcattttaaa
caaaatgggaaacgtcctcacgacaacgaccgcgccccacataaacacgatcgaaatcgc
aaaagggataaacgacatacaagtcatacacattctaccgcgaaagattctcacaagaaa
aaaccggctgctgcaattcaagaagcagagttatttttgcaaaaggcggattccgtttta
tcctcagaaccgaaaggaaaaaaatctgcaaaagaccaacatagatttcagaacaaagac
aaacagagccgaacggggcgtggtgcacagaatagtcgaaatcagaataaaaatcaacag
ttcggtaaacaatacgataaaaacaaacggaatctattcgatataaacgatacggtaaaa
gaagatactaaaaagaaaaaggtttcgatttggcaaaaaatcaaatctatctttgggggc
tga
DBGET
integrated database retrieval system
