Leptospira interrogans serovar Copenhageni: LIC_11616
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Entry
LIC_11616 CDS
T00166
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
lic
Leptospira interrogans serovar Copenhageni
Pathway
lic00541
Biosynthesis of various nucleotide sugars
lic01100
Metabolic pathways
lic01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
lic00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LIC_11616 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
lic01005
]
LIC_11616 (rfaD)
Enzymes [BR:
lic01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
LIC_11616 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
lic01005
]
Core region
LIC_11616 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
ThiF
PS_pyruv_trans
Motif
Other DBs
NCBI-ProteinID:
AAS70211
UniProt:
Q72RX2
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All DBs
Position
I:1978631..1979611
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AA seq
326 aa
AA seq
DB search
MNSMAKKKCIVTGGAGLIGSNLVQELNRLGIDDILVVDHLGTSSKWKNLVGKRYSDYLEK
KTFLEHTTRNFLLKDYDILFHLGACSSTTETDASYLVENNFEYTKLLAEESLKNGVRFVY
ASSAATYGDGANGYDDKTPIDLLKPLNMYGYSKHMFDLYAQRRGFLNRITGIKYFNVFGY
GEGHKGDMRSVVLKGYEQIKKEGKIRLFKSYKPEYKDGEQKRDFLYAKDAAKITAYLAFG
DHNGIYNLGRGIAETWNDLVFAIFDTLKLSINIEYIEMPETLKSKYQYYTCADTTKLLKT
GYSEGFTQLKDAVSEYVTLLDEEEGT
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
ttgaattctatggcaaaaaagaaatgtatcgttaccggtggtgcggggcttatcggttct
aatctagttcaagaacttaatagactaggaatcgatgatattctagttgtggatcatttg
ggaacttcttccaagtggaaaaatttagtcggaaaaagatattcagattatctggaaaaa
aaaacattcttagaacatacaactcgaaactttctattaaaagattatgatattttgttt
catttgggagcctgttcttctactacagagacggatgcgtcttatttagtggaaaataac
tttgaatatacaaaacttcttgccgaagaatctttaaaaaacggagttcgatttgtatat
gcttcttccgccgctacctatggagacggagccaatggatacgatgataaaactcccatt
gacttactcaaacctttaaatatgtacggatattcaaaacatatgtttgatttatacgct
caaagaagagggtttttaaatcgaattactggaatcaaatatttcaatgtatttggatat
ggagaaggacataagggggatatgagaagtgtagttcttaaggggtacgaacaaatcaaa
aaagaaggtaaaatccgtctttttaaatcgtataaacccgaatataaagacggagaacaa
aaaagagattttttatacgcaaaagatgccgcaaaaatcaccgcctatttggcatttggc
gatcataacggaatttataatttaggaagaggaattgcagaaacctggaacgacctagta
ttcgcaatttttgatactttaaaactttctatcaatatagaatatattgaaatgccagag
actcttaaatcaaaataccaatattatacttgtgcagataccacaaaacttttaaaaacc
ggttattcggaaggttttactcaattaaaggacgcagtcagtgaatatgtaaccctcctc
gatgaagaagagggtacataa
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