Leptospira interrogans serovar Copenhageni: LIC_12701
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Entry
LIC_12701 CDS
T00166
Symbol
pnpA
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lic
Leptospira interrogans serovar Copenhageni
Pathway
lic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LIC_12701 (pnpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lic03019
]
LIC_12701 (pnpA)
03016 Transfer RNA biogenesis [BR:
lic03016
]
LIC_12701 (pnpA)
Enzymes [BR:
lic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LIC_12701 (pnpA)
Messenger RNA biogenesis [BR:
lic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LIC_12701 (pnpA)
Transfer RNA biogenesis [BR:
lic03016
]
Prokaryotic type
tRNA degradation factors
LIC_12701 (pnpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_2
TAtT
Motif
Other DBs
NCBI-ProteinID:
AAS71259
UniProt:
Q72NX7
LinkDB
All DBs
Position
I:complement(3286398..3288494)
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AA seq
698 aa
AA seq
DB search
MTHTISGQYGRDTIVLETGSWAKQAHGAVVYKSGNLVLLATVCAADEAKEGQDFFPLTCE
YTEKLYSVGRFPGGYFKREAKPPEHEILISRIIDRPIRPLFPEGYFCEVQLQVQVLSADG
DVSVAGHALNAASAALAVSDIPFNGPIAGARIGRVNGELILNPTTKEILNSDLDLVVAGT
KTHIVMIEGEAKELSNEEMIAALRFAQKHIAEFVTLQEEYAKKIGVVKREVKLKVRDEEL
LSKVKEYAFAKLTTANQTPDKTARNKEISNVNKEVVEFFKDTIEDSDKIKDIKAYLHELE
YEIVREQVLTKGTRFDGRKLDEIRSISVEINPLPGPHGSAVFTRGQTQSLGVVTLGTGSD
NQRYETLEGQKEKSFMLHYNFPAFSVGEVRRSSGPGRREIGHGNLAERALKLVLPKPDEF
PYVIRVVSEILESNGSSSMASVCSGSLALMAAGVPIQGSVSGIAMGLFSDSSGKYAVLSD
IAGLEDHFGDMDCKIAGTRKGITAFQMDLKVTGVSFDVLESVFEQAQRGRFHILDIMEKH
ISKASSTLAGTAPRIIVRNIPKDRIGELIGPGGKNVRGISELTGAELYIEDDGKVTISGS
NQESAEKAAKMVDGFFAEVEVGKIYEGKVKRIADFGAFVEILPGKEGLCHISKIDFKRVN
SVKDIVKEGDIIRVKVLNVDKTGKIDLSRKDALEEEQV
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgacacacacaatttccggccagtatggccgagatacgatcgttttagaaaccggaagc
tgggcaaaacaagcacacggagccgttgtttataaatctggaaatttagttttacttgct
accgtatgcgctgctgatgaagcaaaagaagggcaggacttttttccacttacttgtgaa
tataccgaaaaactttattcagttggtcgttttcctggtggttattttaaaagagaagcc
aaacccccggaacatgaaattttaatttctagaattatagacaggccaattcgtccctta
tttccagaaggttatttctgcgaagtgcaacttcaagttcaagtactttctgcagatggg
gacgtttctgttgcaggacatgctttaaatgctgcaagcgctgcattagcagtttctgat
attccctttaatggcccaattgcaggcgcaagaattggtagagtcaacggagaattgatt
ctaaatcctactactaaagaaatcttaaattccgatttagatttggtcgttgccggaact
aaaactcacattgtaatgattgagggagaagcaaaagaacttagtaatgaagaaatgatt
gctgctcttcgttttgctcaaaaacatattgcagaatttgtaactcttcaagaagaatat
gcgaaaaaaatcggagtcgtcaaacgcgaagttaaattgaaagttcgggatgaagaactt
ctttctaaggtaaaagaatatgcgtttgcaaaactaactacggctaatcaaactccagat
aaaactgcacgtaataaagaaatttctaatgtaaataaggaagtagtagaatttttcaaa
gatacgattgaagactctgacaagattaaggatataaaagcatatcttcacgaattggaa
tatgaaattgtaagagaacaagttcttacaaaaggaactcgttttgatggtagaaagtta
gacgaaatccgttctatttccgtggaaatcaatcctcttcccggtcctcatggttctgca
gtttttacgagagggcagactcagtctttgggagttgtgactttagggaccggttctgat
aatcaaagatacgaaactttagaaggtcagaaagaaaaatctttcatgctacattataat
tttcccgcgttttctgtgggggaagttcgtagatcttccggtccaggtagaagggaaatc
ggtcatggaaatctcgcagaacgtgcgttaaaacttgttcttcctaaaccggatgagttt
ccttatgtaatccgggttgtatctgaaattttagaatccaacggctccagttctatggct
tctgtttgttccggttctttggcgcttatggctgcgggtgttccgattcagggaagtgtt
tctggaattgcaatggggcttttttctgattcttccggtaagtatgcagttttatccgat
attgcgggtctggaagaccattttggtgatatggattgtaaaatcgccggaaccagaaaa
ggaattaccgcgtttcaaatggatttgaaagtgactggtgtcagcttcgatgttttggaa
agcgttttcgaacaagcacagagaggtagatttcatattttggatattatggagaaacat
atatccaaggcttcctcgacgttagccggaactgcgcctcgtatcatcgttagaaatatt
cctaaagatagaatcggggaattgatcgggcctggtggcaaaaacgttagagggattagc
gaacttaccggagctgaactttatatagaagacgatggaaaagtgactatctctggttcc
aaccaagagtccgcagaaaaagcggccaaaatggtagatgggttttttgcagaggtagaa
gtaggaaaaatttacgaaggaaaagtaaaacgaatcgccgatttcggtgcatttgtggaa
attcttccaggtaaagaaggcctttgccatatttccaagatcgattttaaaagagtaaat
tcggtcaaagatatagttaaagaaggcgatattattcgagtgaaagttttaaacgtagat
aaaaccggaaaaattgatctttccagaaaagacgctctcgaagaagaacaagtataa
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