Lactobacillus iners: GYK47_01025
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Entry
GYK47_01025 CDS
T08045
Name
(GenBank) replication-associated recombination protein A
KO
K07478
putative ATPase
Organism
lid
Lactobacillus iners
Brite
KEGG Orthology (KO) [BR:
lid00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
GYK47_01025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_5
AAA_14
Sigma54_activat
AAA_16
DNA_pol3_delta2
AAA_22
AAA_19
AAA_3
Sigma54_activ_2
AAA_2
TIP49
AAA_24
Parvo_NS1
RCF1-5-like_lid
nSTAND3
IstB_IS21
VapE-like_dom
NB-ARC
Mcl1_mid
Motif
Other DBs
NCBI-ProteinID:
QIC19008
LinkDB
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Position
complement(222945..224252)
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AA seq
435 aa
AA seq
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MQPLAYRMRPHSLTDVVGQQHLIGPGKIITRMVEAKLLSSMILYGQPGIGKTSIATAIAG
ATKYAFRKLNAATDSKKDLQIVAEEGKMSGTVILLLDEIQRLDKSKQDFLLPLLESGQII
LIGATTENPYIAISPAIRSRCQIFELKPLQSEDISKAIDHALLDPINGLGKENVTLTPEA
RNILIQKGNGDLRSTLNALELAVLSTKQELMQTNQYHNKLTISESEMLNSVQFKSYNFDS
NGDSHYNLLSAFQKSIRGSDTDAALFYLAELCLAGDLKSICRRLLVTAYEDIGLANPAAC
SRTTLAVQAAEAVGLPEAKIILANSIIELCTSPKSNSAYLAINQAIDLVANTKDIDIPLS
LKDAHFKGAAKLKHGQGYKYPHDFNKDWIAQQYLPDQLINTILFKPKGNSKFEEAIKAQY
LKLKDLQTKNLNKSN
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccattagcatatagaatgcgaccacatagtttaactgatgttgttggccagcaa
catctaattggtccaggaaaaatcatcactagaatggtagaagccaaattattatcttct
atgattctttatggtcaaccaggaattggcaaaactagcattgctacagctattgctggt
gcaactaagtatgcatttagaaaattaaatgcagctacagattcaaaaaaagatttacaa
attgttgccgaagaaggcaaaatgagtggtactgttattctattattagatgagatacag
cgattggataaaagtaaacaagattttttattacccctgttggaatccgggcagattatt
ttaatcggtgctactaccgaaaatccatatattgctatctcacctgctattagatcacgt
tgtcagatttttgaactaaaaccacttcaatcagaagatatttctaaggctattgatcat
gcgttacttgatccaattaatggattaggcaaagaaaatgttactttaacgccagaagct
agaaatattttaattcaaaaaggaaatggcgacttgcgatcaacccttaatgccttagaa
ctagctgtattatcaaccaaacaagaattaatgcagacaaatcaatatcacaataaattg
actatttctgaaagtgagatgctgaattctgtacaattcaaatcatacaattttgacagt
aatggtgatagtcactacaatctcctttctgcatttcagaaatcaatccgcggatcagat
actgatgctgcacttttctatttagctgaactatgtctagctggagatttaaagtcaatt
tgtcgaagattattagtaactgcatacgaagatattggtctagccaatcctgctgcatgt
agtcgtactaccttggctgtacaagcagctgaagctgtaggtttaccagaagcaaaaatt
attttagcaaatagtattatcgaattatgtacttcacctaaaagtaacagtgcttactta
gccattaatcaagcaattgatttagttgctaatacaaaggatattgatattccattatcc
ctaaaagatgcacattttaaaggagccgctaaactaaagcatggccaaggttataaatat
ccgcatgattttaataaagattggatagcacaacaatatttacctgatcaactaattaat
actattctttttaaacctaaaggtaattctaaatttgaagaagcaattaaagctcaatat
ttaaaattaaaggatttacaaactaaaaatttaaataaaagtaactaa
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