Lactobacillus iners: GYK47_01165
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Entry
GYK47_01165 CDS
T08045
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lid
Lactobacillus iners
Pathway
lid03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GYK47_01165 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lid03400
]
GYK47_01165 (priA)
Enzymes [BR:
lid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GYK47_01165 (priA)
DNA repair and recombination proteins [BR:
lid03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GYK47_01165 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
ResIII
DEAD
PriA_C
Zn_ribbon_PriA
Helicase_C
AAA_30
PIF1
Zn_ribbon_6
AAA_19
HypA
SLFN-g3_helicase
Cas3-like_C_2
T2SSE
IBR_1
RecA
UvrD-helicase
Zn_ribbon_PF0610
Motif
Other DBs
NCBI-ProteinID:
QIC18241
LinkDB
All DBs
Position
250978..253368
Genome browser
AA seq
796 aa
AA seq
DB search
MFAEVIVDVAAKQTDKTFEYKIPSELKNVAVGSRVVVPFGRRKVQGFVVDIHAEANYQGE
LKELSLVLDDQIPLIPELVKLSEVLARKLFTYRISILQAMLPSMLKAGYKKNIVPLTDSA
RALPIFNGKAIDAATVRSNTDILLINKLLATKAAKIDYVVKNKASHKKNLIYSISNPKKD
YLEILANLRTNAFKQKILLNDIIENYESYPKRQQELANLGIKSDVLRNAVNNNWLQKQEV
DVYRDPTAADMIHASKVLQLNAEQQAALDQINAQIVRKNAKTFLLEGITGSGKTEVYLHA
IAECLKNNKSALMLVPEIALTPQMVNQVKSRFGKDVAVLHSALSEGEKYDEWCRIRNQET
HVVVGARSAIFAPLTNIGLIIIDEEHEASYKQDNTPRYHARDVAILRSEYNHCPLVLGSA
TPSLYSRARAQKGVYQLLRLNNRANNKELPKVQIIDLKKAMFAGTQFDISVDMLNVIKKT
IAKKEQVILLLNRRGFSNFMLCRECGYVLQCPNCDISLNYHKDINQMKCHYCGYEINKPY
VCPKCHSKHIIFLGSGTQKIQEELINMIPNVRILRMDIDTTRKKGSYQKILSAFGQGQAD
ILLGTQMIAKGLDFPNVTLVCVVNADIGLAVSNYNASEKTFDLLTQVAGRAGRADKEGLV
LIQTYNPDHYAIKLASVQDYEQFYQSEMRYRYIGNYPPFYFTTLVSIVSHNEPLAAKQAF
LIKRLLTKKLSQATIVLGPTPSAIGKINNQYFYQILVKYKKEPHLAETLSYIQNYAQDIA
KNDINVYIDQEPENIM
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagaagtaattgtagatgtagcagctaaacaaactgataaaacgtttgagtat
aagattccatctgaattaaaaaatgttgcagtaggatcacgcgttgtcgtaccatttggc
aggcgaaaagtgcaaggatttgttgttgatattcatgcagaagctaattatcaaggtgaa
ttaaaagaattatcgttagtcttagatgatcaaattcctttaataccagagttagttaaa
ctttctgaagttttagcacgtaaattatttacgtatagaatttctattttgcaggctatg
ttaccgagtatgttaaaagctggatataaaaaaaatattgtacctttgactgattcagct
agagcattaccaatttttaatggtaaagcgatcgatgctgcgactgtaagatctaatacg
gatatattattaatcaataaattattagcaactaaggctgccaaaatagattatgtcgtc
aaaaataaagctagtcataaaaagaatctaatatattcaatcagtaatcctaaaaaagac
tatttggaaattttggctaatttaagaactaatgcttttaagcaaaaaatattattgaat
gacattatagaaaattatgaatcatatcctaaaagacaacaagagctggctaatttgggt
attaaatcagatgttttaagaaatgcagttaataataattggttgcaaaagcaagaagtt
gatgtataccgtgatccaactgcagctgatatgattcatgcatcaaaagtgttgcaatta
aatgctgagcaacaagctgctctagaccaaattaacgcacaaatagtccgaaaaaatgct
aaaacttttttattagaaggtataactggaagtggaaaaactgaggtatatttacacgcc
attgctgaatgtttaaaaaataacaagagtgcattaatgttagttcccgaaatagcacta
acgccgcaaatggtcaatcaagttaaaagcagatttggaaaagatgtagctgtattacat
agtgcactatctgagggtgaaaaatatgatgagtggtgtcgaattcgcaaccaagaaaca
catgtagtcgtgggagcgagaagtgctatttttgcaccgttaactaacattggtttaatt
attattgatgaagagcatgaagcaagttataaacaagataatactcctaggtatcatgca
cgtgatgtagctattttaagaagtgaatacaatcattgtccgttagtattagggagtgca
actccatcattgtatagtagagctcgtgctcaaaaaggtgtttatcaattactgcgactt
aataatcgagctaataataaggaactacccaaagtgcaaattatcgacttaaaaaaagcg
atgtttgcagggacgcaatttgatatttctgttgatatgttgaacgtaataaaaaagacc
atagccaagaaagaacaagttatcttattgttaaatcgacggggattttccaattttatg
ttatgtcgtgagtgtggttatgttttacaatgtcctaattgtgatatttcgctgaattat
cataaagacattaatcaaatgaaatgtcattattgtggctatgaaattaataaaccatat
gtgtgtcctaagtgtcatagcaagcatattatttttttgggtagtggtactcaaaagatt
caagaagaacttattaatatgattcctaacgtgcgtattttacgtatggatatagatacg
acacgaaaaaaaggtagctatcaaaaaatattatctgcctttggacaaggtcaagcagat
atattgttaggtacacagatgattgctaaggggcttgattttcctaatgttacactggtt
tgtgttgttaatgctgatattggcttggctgtttctaattataatgctagtgaaaaaaca
tttgatttattaacgcaagtagctggtagagctggtagggcagataaagaaggattggtt
ttgatacaaacttataatccagaccattatgcgattaaattagctagtgtacaagattat
gagcaattttatcaaagtgaaatgcgataccgatatattggtaattatccaccattttat
tttacaactttggtttcgattgtctcgcataatgaacctctggctgctaagcaggctttt
cttatcaaaagactattgactaaaaaattaagtcaagcaacgatcgttttggggccaact
cctagtgcaattggtaaaataaataatcaatatttttatcaaatactggtaaaatataaa
aaagaacctcatttggctgaaactttgagttatattcaaaactatgctcaagatattgcc
aaaaatgatattaatgtttatatagatcaagaaccagaaaatattatgtag
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