Lactobacillus iners: GYK47_01795
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Entry
GYK47_01795 CDS
T08045
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
lid
Lactobacillus iners
Pathway
lid03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GYK47_01795 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lid03400
]
GYK47_01795 (recO)
DNA repair and recombination proteins [BR:
lid03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GYK47_01795 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GYK47_01795 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
QIC18337
LinkDB
All DBs
Position
402461..403207
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AA seq
248 aa
AA seq
DB search
MSKELIEVSGLVFKQKKYKDFDVLSKIMTAENGIFTLLIKGGLKPKSRLLPATINFSYGN
YLINTNYCGLSVLRNYKVVHQLEHIYFDFKGNAYANYLLDLVDHAYADYQPLGKNYYLVF
NALVKINEGIDNEIICQMVELKLLSAFGTMPEFRHCVFCDASQGIFDFSLQLGGIVCKNH
FGSANTRMCLDAKTMGLIRTLALIDIQQLGQINISDNLKQQSRKFIDILYEQYLDLHLKT
KKYLKEVL
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaagaactgattgaagtttcaggtttagtttttaaacaaaaaaaatataaagac
tttgatgttttatccaaaattatgacagcggagaatggcatctttactttattgataaaa
ggcggattaaaaccaaagtcacgtcttttacctgccacaattaatttttcttacggaaat
tatttaattaatacaaattattgcggcttaagtgttttgagaaattacaaagttgtccat
caattagaacatatctatttcgattttaaaggaaatgcttatgcaaattatttgttggat
ttagtggatcatgcctatgcggattatcaaccattaggaaaaaattattatttagttttt
aatgcactagtgaagataaatgaaggtatagataatgaaattatatgtcaaatggtagaa
ttaaaattgctatctgcctttggtacaatgccagagtttaggcattgtgttttttgtgat
gctagccaaggtatattcgatttttctttacagttgggtggcattgtttgtaagaatcat
tttgggagtgcaaacacgaggatgtgtttagatgctaaaaccatgggtcttattaggaca
ttagccttgattgatattcagcagcttggtcaaataaatattagtgataacctgaagcag
cagagtagaaaatttatagatattctttatgaacaatatttagatttacacttaaagacc
aaaaagtatttaaaagaagttctttga
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