Lactobacillus iners: GYK47_02215
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Entry
GYK47_02215 CDS
T08045
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
lid
Lactobacillus iners
Brite
KEGG Orthology (KO) [BR:
lid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lid03009
]
GYK47_02215
Enzymes [BR:
lid01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
GYK47_02215
Ribosome biogenesis [BR:
lid03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GYK47_02215
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
S1
Motif
Other DBs
NCBI-ProteinID:
QIC18397
LinkDB
All DBs
Position
complement(495984..496703)
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AA seq
239 aa
AA seq
DB search
MKLRLQKVIAEAGIASRRKAEILITSGQVTVNGNLVTTLGTKVDDNDKIEVNGVPIHKEQ
LHTYLLYKPRNVVSTVSDNKGRKTVTDFFKDLPYRLYPVGRLDYDTSGLLLMTNDGELAN
RLMHPKNEIEKVYVAKIRGFLTASEIYDLKHGVTIDGRKTAPAKVKIIKTDKNRNIQLVQ
LTIHEGHYHQVKNMFKAVNHLVEKLSRERYAFLTLKSLISGEYRELTHEEINKLKHSEN
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaagattgcaaaaagttattgctgaagcaggaatagcatcaagaagaaaggct
gaaatacttattacctcgggccaagttacagtaaatggaaatcttgttacgacattggga
actaaagtggacgataacgataaaattgaagttaatggagttcctatccataaagaacag
ttacatacgtatcttttgtataaaccacgtaatgttgtatcaactgttagtgataataaa
ggccggaaaacagtaaccgatttttttaaggatttaccttatagattatatccagtaggt
cggttggattatgatacatctggcttgttgttaatgactaacgatggtgaacttgctaac
cgtttgatgcatcccaaaaatgaaattgaaaaagtttatgtagctaaaattaggggcttt
ttaactgctagtgagatatatgatttaaaacatggtgtaacaattgatggtaggaagaca
gcaccagctaaagtcaaaatcattaaaacagataagaatcgcaatattcagttggtccag
ttgaccattcatgaaggtcattatcatcaagtcaaaaatatgtttaaagcagttaatcat
ttggttgagaaattatcacgtgaacgttatgcttttctaactttgaaatcattgatttcg
ggtgaatatagagagttgacacatgaagaaattaacaaattaaaacatagtgaaaattaa
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