Lactobacillus iners: GYK47_02235
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Entry
GYK47_02235 CDS
T08045
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
lid
Lactobacillus iners
Brite
KEGG Orthology (KO) [BR:
lid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lid03036
]
GYK47_02235 (xerD)
Chromosome and associated proteins [BR:
lid03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
GYK47_02235 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_5
Phage_integr_3
DUF3435
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
QIC18401
LinkDB
All DBs
Position
complement(498388..499278)
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AA seq
296 aa
AA seq
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MNDSLEDYLRFAQIERGLSNNTLLSYRQDLLEYFSFLKSLGITTWEVDALIIDSFLAQER
DKGKAIASISRMLSSLRKFYQWLFRQNLIKQDPLLRIDSPKKEKRLPTALSTTEVTKLIN
MPDTTTDLGIRDRAILETLYATGMRVSEVINLNEDSIHEELHLIKVFGKGSKQRLIPISN
VAMSWIKKYQITVRNKTLLESGKFEKAIFLNSRGGKITRQAVWQMIKRYCQLAGINKNVT
PHTLRHTFATHLLENGADLRIVQEILGHSDISTTQIYTNLTQKHIMDVYKRTHPRI
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatagtcttgaagattatttgcgttttgcccaaattgaacgtggattgagtaat
aatactttattatcctatcggcaagatttattggagtatttctcatttttaaaatcattg
ggtattactacatgggaagtagacgctttaattatcgattcgtttttagcacaagagcgt
gataaaggaaaagctattgcaagtattagtcgtatgttatcaagtttgagaaaattttat
caatggttgtttagacaaaatttgattaaacaagatcctcttttgagaattgattctccg
aaaaaagaaaaaaggttacctactgctctgagtactacagaggtgactaaattgattaat
atgcctgatactacaacagatttaggaattagagatcgtgcaattttagagactttgtat
gctactggtatgcgagtaagtgaagttattaatctaaatgaggatagtattcatgaagaa
ttgcatttaattaaagtatttggtaagggatcaaagcaaagactcatacctatcagtaat
gttgctatgtcatggataaaaaagtatcagattacagtgagaaataaaacgctcttagaa
tctggcaaatttgaaaaagcaatatttttaaatagtaggggaggaaaaattactagacag
gccgtttggcaaatgataaaacgttattgccaattagcagggatcaataaaaatgttact
ccacatacattacgccatacatttgcaacacatttattagaaaatggtgcagatttgcgt
attgttcaagaaattttgggccatagtgatatttctaccacacagatttatactaattta
actcaaaaacatattatggatgtttataaacgtacacatcctcgtatttaa
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