Lactobacillus iners: GYK47_02365
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Entry
GYK47_02365 CDS
T08045
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lid
Lactobacillus iners
Pathway
lid03030
DNA replication
lid03430
Mismatch repair
lid03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GYK47_02365 (holA)
03430 Mismatch repair
GYK47_02365 (holA)
03440 Homologous recombination
GYK47_02365 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lid03032
]
GYK47_02365 (holA)
03400 DNA repair and recombination proteins [BR:
lid03400
]
GYK47_02365 (holA)
Enzymes [BR:
lid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GYK47_02365 (holA)
DNA replication proteins [BR:
lid03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GYK47_02365 (holA)
DNA repair and recombination proteins [BR:
lid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GYK47_02365 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Uteroglobin
DUF7014
PriCT_1
BORCS7
DUF6671
Motif
Other DBs
NCBI-ProteinID:
QIC18422
LinkDB
All DBs
Position
complement(526659..527645)
Genome browser
AA seq
328 aa
AA seq
DB search
MTLISLFKQSNKDKNHLLIYGTNDLLNNYIMTDFVKQKQFSNYDLIYVDVLESGIDGLIA
TLSESSLFSLQRLIIVKNPIFLSTKFVVKDSKQLEKLKQLIDNLSVLDDLIVFVANYEKI
DKRKAIVKLLMKNVNVVETNFKAQEVAKILKSIAAAEKIKFIGDAFTELIKRSDNVFSLA
LNNYLKLKNIVEGKEILPEVVKSNIDQSLSENVFEIMTAIFNKNYVEANRRLDDQINNGL
TPIALLAIFESQLEFLLCVKILQKRGWVKDQIVDELDANPYRIYYALNNRLDITRLKQSI
KYAIKLDYGYKNGTYTGASFLKAYLLNI
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacattaatatcattatttaaacaatctaataaagataaaaaccatcttttaatttat
ggtaccaatgatttacttaataattacataatgacagattttgttaaacaaaaacaattt
agcaattacgatcttatatatgttgatgttttagaatctgggatagatggattaattgcc
acactgagcgagtcctcattatttagtttgcaaaggctaattattgttaaaaatccaata
tttttgagtactaaatttgtagttaaggattctaaacaattagaaaaattaaaacagtta
attgataatttatctgttttagatgatttgatagtttttgtggctaattatgaaaaaatt
gataaacgtaaagctattgttaaattgttaatgaaaaatgtaaatgttgtagaaaccaat
tttaaagctcaagaagtggctaaaattttgaaatctattgctgctgcagaaaaaataaaa
tttattggggatgcatttacggaattaattaagcgaagtgacaatgttttttcgctagct
ttaaataattatttaaaattaaaaaatattgttgaaggtaaagaaatattacctgaagtt
gttaaaagtaatatcgatcagtctttatctgaaaatgtttttgagattatgactgctatc
tttaataaaaattatgttgaagctaatcgtagattagacgaccaaatcaataatggactg
acaccgattgcattattagcaatttttgagagccagttggaatttttattgtgtgttaag
attttacaaaaaagaggatgggttaaagatcaaattgttgatgaattagatgccaatcct
tatagaatatactatgctttaaacaacaggttagatattactcgtctaaagcagagtatt
aagtatgcgataaaattagattatggatataaaaatggtacttatacaggtgcatctttt
ttaaaagcatatctattaaacatataa
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