Lactobacillus iners: GYK47_02610
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Entry
GYK47_02610 CDS
T08045
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lid
Lactobacillus iners
Brite
KEGG Orthology (KO) [BR:
lid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lid03016
]
GYK47_02610 (truB)
Enzymes [BR:
lid01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GYK47_02610 (truB)
Transfer RNA biogenesis [BR:
lid03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GYK47_02610 (truB)
Prokaryotic type
GYK47_02610 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
DUF6853
Motif
Other DBs
NCBI-ProteinID:
QIC18445
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All DBs
Position
complement(565805..566698)
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AA seq
297 aa
AA seq
DB search
MLNGIIVLNKPRGVTSSDCVYKLRKLLKIKKIGHAGTLDPEVNGVLPIAVGQATKLIEKM
HEKDKKYIGVGLLGFATDSYDVTGKKIAEKKIITPFSDEEIQSGMKKLVGDISQMPPIYS
AVKVNGKRLYEYARENIEVQRPMRDVTVKSYNLVNTSTYDYEKQQQTFDFSVTCSKGTYV
RSLVNDLGAILDVPAVMVKLTRIASSGYNITDAVTLEDISRQIDQPHFWLQPIDSFFDNV
EHFVLNSEQYDQVRNGAALKINASSNEVALVYSGKIKAIYEKKLNVYKPQLMLLQND
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgctaaatgggattattgtattaaataagccacgtggagtaacaagtagtgactgcgtt
tataaattacgaaaactattaaaaataaagaaaataggtcatgctgggacgttagatcca
gaggtaaatggtgttttacctattgcagttgggcaggcaactaaattaatagagaaaatg
catgaaaaagataaaaaatatataggtgtaggcttattaggttttgctaccgatagttat
gacgtaactggtaagaaaatagcagagaaaaaaatcataactcccttctcggatgaagag
attcaatctgggatgaaaaaattagttggtgatatttctcagatgcctcccatatattct
gcagtcaaagtcaatggcaaaagattatatgaatatgctagggaaaatattgaagtacag
cgtccaatgagagatgtaacagtaaagagctataatttagttaatacttctacttatgat
tatgaaaagcagcaacaaacgtttgatttttctgttacatgctctaaaggaacttatgtt
aggtcattagtaaatgatttaggtgctatattggatgtacctgcagttatggttaaatta
acgcgaattgctagttctggctataatattacagatgcagtaacattagaagatattagc
agacaaatagatcaacctcatttctggttacagcctattgacagtttttttgataatgta
gagcattttgttttgaattcagaacaatatgatcaggttagaaatggagcagctttgaaa
ataaatgcctccagcaatgaagtagcattagtttatagcggtaaaattaaggccatatat
gaaaaaaaactaaatgtttataaaccacaattaatgcttttacaaaatgattaa
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