Lactobacillus iners: GYK47_03565
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Entry
GYK47_03565 CDS
T08045
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lid
Lactobacillus iners
Pathway
lid03030
DNA replication
lid03430
Mismatch repair
lid03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GYK47_03565
03430 Mismatch repair
GYK47_03565
03440 Homologous recombination
GYK47_03565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lid03032
]
GYK47_03565
03400 DNA repair and recombination proteins [BR:
lid03400
]
GYK47_03565
Enzymes [BR:
lid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GYK47_03565
DNA replication proteins [BR:
lid03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GYK47_03565
DNA repair and recombination proteins [BR:
lid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GYK47_03565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QIC18565
LinkDB
All DBs
Position
737242..737775
Genome browser
AA seq
177 aa
AA seq
DB search
MNFTAMDFETANRHYDSACSLALVLVRDNKIIDSFYTVINPQMPFDKNNIKIHGITANDV
KDAPTMNEVWPKIRLLFQPGMLVVAHNARFDCNVMKKSLKKYNIAEPHYLTIDTLATSRA
LMPNLKNYRLDTVSNQLNIDLWHHHNALSDSEACAEILIKQNQQFGDEQIKNFIKYI
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcactgcaatggactttgaaacagctaatcgtcattatgatagtgcttgttca
ctagccttagttttagttagagataataaaattattgacagtttttatactgtaattaat
ccacaaatgccttttgataaaaataatattaaaattcatggtataacagctaatgatgta
aaagatgcaccaaccatgaacgaagtttggccaaaaataagattattatttcaacctggt
atgctggttgtagctcataatgcacgttttgactgtaatgtcatgaaaaaatctttgaaa
aaatataatattgccgaaccacactatcttaccattgataccttagctacaagtagagca
ttgatgccaaatttaaaaaattatcgtttggacactgtatccaatcaattaaatattgat
ttatggcatcatcataatgcattaagtgatagtgaagcatgtgctgaaatcttgattaaa
caaaatcaacagtttggtgatgaacaaatcaagaactttattaaatacatataa
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